> RAR-related orphan receptor B (RORB)
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UGID:709337     UniGene Hs.494178     Homo sapiens (human)   RORB Order cDNA clone, Links
RAR-related orphan receptor B (RORB)

Human protein-coding gene RORB. Represented by 43 ESTs from 30 cDNA libraries. Corresponds to reference sequence NM_006914.3. [UniGene 709337 - Hs.494178]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001098796.1 PREDICTED: nuclear receptor ROR-beta-like M. mulatta 100.0 458
XP_003911863.1 PREDICTED: nuclear receptor ROR-beta P. anubis 100.0 458
XP_001144112.1 PREDICTED: nuclear receptor ROR-beta isoform 1 P. troglodytes 100.0 458
NP_008845.2 RORB gene product H. sapiens 100.0 458
XP_002708255.1 PREDICTED: RAR-related orphan receptor B O. cuniculus 99.8 458
NP_001036819.1 Rorb gene product M. musculus 98.7 458
NP_001076325.1 rorb gene product D. rerio 88.3 461
NP_001032969.1 Protein NHR-23, isoform d C. elegans 71.8 142
NP_001097256.1 hormone receptor-like in 46, isoform D D. melanogaster 68.3 145
Other hits (2 of 28) [Show all]SpeciesId(%)Len(aa)
NP_001179587.1 nuclear receptor ROR-beta B. taurus 99.1 458
NP_001123209.1 RORB gene product O. aries 99.1 458

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; eye; placenta; mixed; embryonic tissue; lung; connective tissue; uncharacterized tissue; muscle; testis; kidney; adrenal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q22
UniSTS entry: Chr 9 SHGC-31325 [Map Viewer]
UniSTS entry: Rorb
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BC051830.1 Homo sapiens RAR-related orphan receptor B, mRNA (cDNA clone MGC:60115 IMAGE:6141868), complete cds PA
BX647070.1 Homo sapiens mRNA; cDNA DKFZp686J0395 (from clone DKFZp686J0395) PA
NM_006914.3 Homo sapiens RAR-related orphan receptor B (RORB), mRNA P
BC093772.1 Homo sapiens RAR-related orphan receptor B, mRNA (cDNA clone MGC:120807 IMAGE:7939617), complete cds P
BC093774.1 Homo sapiens RAR-related orphan receptor B, mRNA (cDNA clone MGC:120809 IMAGE:7939619), complete cds P
AK313431.1 Homo sapiens cDNA, FLJ93970, Homo sapiens RAR-related orphan receptor B (RORB), mRNA P
Y08639.1 H.sapiens mRNA for nuclear orphan receptor ROR-beta P
AB307695.1 Homo sapiens NR1F2 mRNA for retinoid-related orphan receptor beta, complete cds P
HQ709186.1 Homo sapiens RAR-related orphan receptor beta (NR1F2) mRNA, complete cds P

EST sequences (10 of 43) [Show all sequences]

R18374.1 Clone IMAGE:31037 brain 5' read
T26966.1 Clone LLAB014D12 brain 5' read
AA723787.1 Clone IMAGE:1326041 mixed 3' read
AI768825.1 Clone IMAGE:2401775 kidney 3' read
BX350110.2 Clone CS0DI040YM09 placenta 3' read P
BX348312.1 Clone CS0DI040YM09 placenta 5' read P
F05544.1 Clone c-0ed12 brain
AL118995.1 Clone DKFZp761I22121 brain 5' read
AW172399.1 Clone IMAGE:2659510 mixed 3' read
CK299107.1 Clone UI-E-EJ1-ajq-o-03-0-UI eye 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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