> Rhomboid domain containing 2 (RHBDD2)
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UGID:703986     UniGene Hs.488827     Homo sapiens (human)   RHBDD2 Order cDNA clone, Links
Rhomboid domain containing 2 (RHBDD2)

Human protein-coding gene RHBDD2. Represented by 713 ESTs from 257 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 703986 - Hs.488827]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_519156.1 PREDICTED: rhomboid domain-containing protein 2 isoform 2 P. troglodytes 100.0 363
NP_001035546.1 RHBDD2 gene product H. sapiens 100.0 363
XP_003895905.1 PREDICTED: rhomboid domain-containing protein 2 P. anubis 99.7 363
NP_666114.1 Rhbdd2 gene product M. musculus 91.1 360
Other hits (2 of 12) [Show all]SpeciesId(%)Len(aa)
XP_001114944.2 PREDICTED: rhomboid domain-containing protein 2-like M. mulatta 98.4 379
XP_546933.2 PREDICTED: rhomboid domain-containing protein 2 isoform 1 C. lupus familiaris 95.0 362

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; pancreas; testis; eye; blood; uncharacterized tissue; lung; pineal gland; amniotic fluid; mixed; ganglia; larynx; trachea; embryonic tissue; placenta; mouth; skin; intestine; salivary gland; ovary; kidney; prostate; uterus; thymus; muscle; stomach; mammary gland; thyroid; adipose tissue; nerve; pituitary gland; bladder; adrenal gland; cervix; lymph; connective tissue; liver; heart; bone; parathyroid; lymph node; esophagus; pharynx; vascular; bone marrow
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 7
Map position: 7q11.23
UniSTS entry: Chr 7 SHGC-2358 [Map Viewer]
UniSTS entry: Chr 7 NIB730 [Map Viewer]
UniSTS entry: Chr 7 RH78544
UniSTS entry: Chr 7 WI-14388 [Map Viewer]
UniSTS entry: Chr 7 GDB:6028678
UniSTS entry: Chr 1 D11S2921
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BC069017.1 Homo sapiens rhomboid domain containing 2, mRNA (cDNA clone MGC:78598 IMAGE:3502576), complete cds PA
AK026590.1 Homo sapiens cDNA: FLJ22937 fis, clone KAT07960 PA
AF226732.1 Homo sapiens NPD007 mRNA, complete cds P
NM_001040457.1 Homo sapiens rhomboid domain containing 2 (RHBDD2), transcript variant 2, mRNA P
NM_001040456.1 Homo sapiens rhomboid domain containing 2 (RHBDD2), transcript variant 1, mRNA P
BC006234.2 Homo sapiens rhomboid domain containing 2, mRNA (cDNA clone IMAGE:3947793), partial cds PA

EST sequences (10 of 713) [Show all sequences]

AA863430.1 Clone IMAGE:1456916 kidney 3' read
AA984067.1 Clone IMAGE:1616352 brain 3' read
AA984085.1 Clone IMAGE:1616376 brain 3' read
AA910947.1 Clone IMAGE:1520796 kidney 3' read A
AI027713.1 Clone IMAGE:1644537 testis 3' read
AI031993.1 Clone IMAGE:1650803 parathyroid 3' read
AI051840.1 Clone IMAGE:1659134 embryonic tissue 3' read
R19873.1 Clone IMAGE:34782 brain 5' read
AI090571.1 Clone IMAGE:1691577 heart 3' read
AI124889.1 Clone IMAGE:1539710 brain 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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