> Sex comb on midleg-like 4 (Drosophila) (SCML4)
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UGID:701268     UniGene Hs.486109     Homo sapiens (human)   SCML4 Order cDNA clone, Links
Sex comb on midleg-like 4 (Drosophila) (SCML4)

Human protein-coding gene SCML4. Represented by 41 ESTs from 27 cDNA libraries. EST representation biased toward adult. Corresponds to reference sequence NM_198081.3. [UniGene 701268 - Hs.486109]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_932347.2 SCML4 gene product H. sapiens 100.0 413
XP_001147087.2 PREDICTED: sex comb on midleg-like protein 4 isoform 3 P. troglodytes 99.5 413
NP_766526.3 sex comb on midleg-like protein 4 M. musculus 82.8 407
XP_001332433.4 PREDICTED: sex comb on midleg-like protein 4-like D. rerio 64.2 410
NP_001083196.1 uncharacterized protein LOC398796 X. laevis 54.3 406
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_003898026.1 PREDICTED: sex comb on midleg-like protein 4 isoform 1 P. anubis 98.5 413
XP_001091410.2 PREDICTED: sex comb on midleg-like protein 4-like isoform 3 M. mulatta 97.8 413

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: adult [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: uncharacterized tissue; mixed; skin; brain; thyroid; intestine; prostate; spleen; thymus; blood; pancreas; testis; eye; connective tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q21
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

NM_198081.3 Homo sapiens sex comb on midleg-like 4 (Drosophila) (SCML4), mRNA PA
AB072902.1 Homo sapiens primary neuroblastoma cDNA, clone:Nbla11778 A
AK093571.1 Homo sapiens cDNA FLJ36252 fis, clone THYMU2002109, moderately similar to Homo sapiens Sex comb on midleg homolog 1 isoform 1 P
AK092812.1 Homo sapiens cDNA FLJ35493 fis, clone SMINT2008715 P
AK303562.1 Homo sapiens cDNA FLJ55567 complete cds, highly similar to Homo sapiens sex comb on midleg-like 4 (SCML4), mRNA P
BC021582.1 Homo sapiens sex comb on midleg-like 4 (Drosophila), mRNA (cDNA clone IMAGE:4870412), with apparent retained intron PA
BC033286.1 Homo sapiens sex comb on midleg-like 4 (Drosophila), mRNA (cDNA clone MGC:25118 IMAGE:4509724), complete cds PA

EST sequences (10 of 41) [Show all sequences]

BX098517.1 Clone IMAGp998M045760_;_IMAGE:2322603 prostate P
AA897395.1 Clone IMAGE:1466175 mixed 3' read P
AI696698.1 Clone IMAGE:2322603 prostate 3' read P
AU253953.1 Clone Nbla11778 brain 5' read
AW452493.1 Clone IMAGE:3068764 uncharacterized tissue 3' read A
CK429231.1 Clone oj33h03 eye 5' read
BE045932.1 Clone IMAGE:2916782 uncharacterized tissue 3' read
CV029351.1 mixed 5' read P
BE349472.1 Clone IMAGE:3150806 skin 3' read A
BE463893.1 Clone IMAGE:3197692 uncharacterized tissue 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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