> Regulating synaptic membrane exocytosis 1 (RIMS1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:700888     UniGene Hs.485729     Homo sapiens (human)   RIMS1 Links
Regulating synaptic membrane exocytosis 1 (RIMS1)

Human protein-coding gene RIMS1. Represented by 101 ESTs from 42 cDNA libraries. EST representation biased toward infant. Corresponds to 6 reference sequences (different isoforms). [UniGene 700888 - Hs.485729]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_055804.2 RIMS1 gene product H. sapiens 100.0 1691
XP_003311440.2 PREDICTED: LOW QUALITY PROTEIN: regulating synaptic membrane exocytosis protein 1-like isoform 5 P. troglodytes 99.9 1691
XP_003897851.1 PREDICTED: regulating synaptic membrane exocytosis protein 1-like isoform 2 P. anubis 99.5 1533
NP_001012641.1 Rims1 gene product M. musculus 94.5 1373
XP_001920682.3 PREDICTED: regulating synaptic membrane exocytosis protein 2, partial D. rerio 67.3 688
NP_001247170.1 Rim, isoform M D. melanogaster 59.3 275
NP_741831.1 Protein UNC-10, isoform a C. elegans 55.4 213
Other hits (2 of 32) [Show all]SpeciesId(%)Len(aa)
NP_001032357.1 regulating synaptic membrane exocytosis protein 1 M. mulatta 99.0 1027
XP_003480320.1 PREDICTED: regulating synaptic membrane exocytosis protein 2 isoform 2 S. scrofa 99.0 825

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: infant [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; kidney; testis; liver; thyroid; uncharacterized tissue; pancreas; intestine; mammary gland; prostate; ear; eye; muscle; mixed
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q12-q13
UniSTS entry: Chr 6 G20454
UniSTS entry: Chr 6 A005R44 [Map Viewer]
UniSTS entry: Chr 6 RH36025
UniSTS entry: Chr 6 SHGC-31710 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (27)

AY190519.1 Homo sapiens Rab3A-interacting molecule (RIM1) mRNA, complete cds, alternatively spliced P
AF263305.1 Homo sapiens rab3 interacting protein variant 1 mRNA, partial cds P
AF263306.1 Homo sapiens rab3 interacting protein variant 2 mRNA, partial cds P
AF263307.1 Homo sapiens rab3 interacting protein variant 3 mRNA, partial cds P
AF263308.1 Homo sapiens rab3 interacting protein variant 4 mRNA, partial cds P
AF263309.1 Homo sapiens rab3 interacting protein variant 5 mRNA, partial cds P
AF263310.1 Homo sapiens rab3 interacting protein variant 6 mRNA, partial cds P
AK309185.1 Homo sapiens cDNA, FLJ99226 P
AK308658.1 Homo sapiens cDNA, FLJ98699 P
AK311105.1 Homo sapiens cDNA, FLJ18147 P
AK095726.1 Homo sapiens cDNA FLJ38407 fis, clone FEBRA2008859 A
AK316108.1 Homo sapiens cDNA, FLJ79007 complete cds, highly similar to Regulating synaptic membrane exocytosis protein 1 PA
AK302571.1 Homo sapiens cDNA FLJ55558 complete cds, highly similar to Regulating synaptic membrane exocytosis protein 1 P
AK300853.1 Homo sapiens cDNA FLJ59993 complete cds, highly similar to Regulating synaptic membrane exocytosis protein 1 P
AK300503.1 Homo sapiens cDNA FLJ51095 complete cds, highly similar to Regulating synaptic membrane exocytosis protein 1 P
AK296303.1 Homo sapiens cDNA FLJ52438 complete cds, highly similar to Regulating synaptic membrane exocytosis protein 1 P
AK295177.1 Homo sapiens cDNA FLJ56626 complete cds, highly similar to Mus musculus regulating synaptic membrane exocytosis 1 (Rims1), transcript variant 5, mRNA P
AK295001.1 Homo sapiens cDNA FLJ53578 complete cds, moderately similar to Mus musculus regulating synaptic membrane exocytosis 1 (Rims1), transcript variant 5, mRNA P
AK294868.1 Homo sapiens cDNA FLJ58366 complete cds, highly similar to Regulating synaptic membrane exocytosis protein 1 P
AK293828.1 Homo sapiens cDNA FLJ51805 complete cds, moderately similar to Regulating synaptic membrane exocytosis protein 2 P
NM_001168411.1 Homo sapiens regulating synaptic membrane exocytosis 1 (RIMS1), transcript variant 6, mRNA PA
NM_001168410.1 Homo sapiens regulating synaptic membrane exocytosis 1 (RIMS1), transcript variant 5, mRNA PA
NM_001168409.1 Homo sapiens regulating synaptic membrane exocytosis 1 (RIMS1), transcript variant 4, mRNA PA
NM_001168408.1 Homo sapiens regulating synaptic membrane exocytosis 1 (RIMS1), transcript variant 3, mRNA PA
NM_001168407.1 Homo sapiens regulating synaptic membrane exocytosis 1 (RIMS1), transcript variant 2, mRNA PA
BC036608.1 Homo sapiens regulating synaptic membrane exocytosis 1, mRNA (cDNA clone IMAGE:5275424), partial cds PA
NM_014989.5 Homo sapiens regulating synaptic membrane exocytosis 1 (RIMS1), transcript variant 1, mRNA PA

EST sequences (10 of 101) [Show all sequences]

AA988785.1 Clone IMAGE:1602606 lung 3' read
AI002692.1 Clone IMAGE:1699193 kidney 3' read A
BX105150.1 Clone IMAGp998D14639_;_IMAGE:287581 brain
AI200874.1 Clone IMAGE:1754655 testis 3' read A
AI299437.1 Clone IMAGE:1898452 lung 3' read
R43839.1 Clone IMAGE:32953 brain 3' read A
T09261.1 Clone HIBBR41 brain 5' read P
T09262.1 Clone HIBBR42 brain 3' read
AI732887.1 Clone IMAGE:1417815 lung 3' read
AI733447.1 Clone IMAGE:1602606 lung 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help