| UGID:700109 UniGene Hs.484950 Homo sapiens (human) HIST1H2AC |
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Histone cluster 1, H2ac (HIST1H2AC)
Human protein-coding gene HIST1H2AC. Represented by 392 ESTs from 188 cDNA libraries. Corresponds to reference sequence NM_003512.3. [UniGene 700109 - Hs.484950]
SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
| Best Hits and Hits from model organisms | Species | Id(%) | Len(aa) |
|
|
Hist3h2a gene product |
M. musculus |
100.0 |
129 |
|
|
PREDICTED: histone H2A type 1-E |
R. norvegicus |
100.0 |
129 |
|
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PREDICTED: histone H2A type 1-E-like |
M. mulatta |
100.0 |
129 |
|
|
PREDICTED: histone H2A type 1-C-like isoform 1 |
P. anubis |
100.0 |
129 |
|
|
PREDICTED: histone H2A type 1-C-like isoform 1 |
P. troglodytes |
100.0 |
129 |
|
|
HIST1H2AC gene product |
H. sapiens |
100.0 |
129 |
|
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PREDICTED: histone H2A type 1-C-like isoform 1 |
C. lupus familiaris |
100.0 |
129 |
|
|
PREDICTED: histone H2A type 1-C-like |
E. caballus |
100.0 |
129 |
|
|
HIST1H2AC gene product |
B. taurus |
100.0 |
129 |
|
|
PREDICTED: histone H2A type 1-C-like |
O. aries |
100.0 |
129 |
|
|
PREDICTED: histone cluster 3, H2a-like |
O. cuniculus |
100.0 |
129 |
|
|
PREDICTED: histone H2A type 2-C-like |
T. guttata |
100.0 |
128 |
|
|
zgc:101846 gene product |
D. rerio |
98.4 |
127 |
|
|
histone cluster 1, H2aj |
X. laevis |
96.9 |
129 |
|
|
histone H2A |
D. melanogaster |
93.5 |
123 |
|
|
histone H2A |
N. crassa |
92.0 |
125 |
|
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Protein HIS-68 |
C. elegans |
90.2 |
123 |
|
|
histone H2A |
C. reinhardtii |
84.2 |
127 |
|
|
Hta1p |
S. cerevisiae |
82.4 |
125 |
|
|
histone H2A 10 |
A. thaliana |
80.2 |
131 |
| Other hits (2 of 54) [Show all] | Species | Id(%) | Len(aa) |
|
|
PREDICTED: histone H2A type 1-like |
O. anatinus |
99.2 |
129 |
|
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PREDICTED: histone H2A type 2-C-like |
A. carolinensis |
99.2 |
128 |
GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
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EST Profile: | Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this] |
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GEO Profiles: |
Experimental gene expression data (Gene Expression Omnibus). |
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cDNA Sources: |
brain; placenta; pancreas; uterus; stomach; mixed; lung; skin; prostate; connective tissue; ovary; intestine; eye; liver; mammary gland; adipose tissue; mouth; cervix; kidney; uncharacterized tissue; blood; bladder; bone marrow; pharynx; heart; bone; lymph node; pituitary gland; muscle; spleen; trachea; testis; thymus; salivary gland; lymph; ascites; nerve; embryonic tissue; thyroid; parathyroid |
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.
mRNA sequences (2)
|
NM_003512.3 |
Homo sapiens histone cluster 1, H2ac (HIST1H2AC), mRNA |
P |
|
AK311811.1 |
Homo sapiens cDNA, FLJ92072, Homo sapiens histone 1, H2ac (HIST1H2AC), mRNA |
P |
EST sequences (10 of 392) [Show all sequences]
|
AA954522.1 |
Clone IMAGE:1555053 |
kidney |
3' read |
A |
|
AA989224.1 |
Clone IMAGE:1601860 |
lung |
3' read |
|
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AI017059.1 |
Clone IMAGE:1636041 |
kidney |
3' read |
A |
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AI032795.1 |
Clone IMAGE:1647080 |
parathyroid |
3' read |
A |
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AI057158.1 |
Clone IMAGE:1670030 |
brain |
3' read |
A |
|
AI074861.1 |
Clone IMAGE:1667048 |
skin |
3' read |
A |
|
R20890.1 |
Clone IMAGE:130065 |
placenta |
5' read |
|
|
AI088905.1 |
Clone IMAGE:1687025 |
brain |
3' read |
A |
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AI088914.1 |
Clone IMAGE:1687426 |
brain |
3' read |
A |
|
AI094996.1 |
Clone IMAGE:1686728 |
brain |
3' read |
A |
Key to Symbols
P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria
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