> Ring finger protein 130 (RNF130)
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UGID:699522     UniGene Hs.484363     Homo sapiens (human)   RNF130 Order cDNA clone, Links
Ring finger protein 130 (RNF130)

Human protein-coding gene RNF130. Represented by 532 ESTs from 233 cDNA libraries. Corresponds to reference sequence NM_018434.4. [UniGene 699522 - Hs.484363]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001143540.2 PREDICTED: e3 ubiquitin-protein ligase RNF130 P. troglodytes 100.0 418
NP_060904.2 RNF130 gene product H. sapiens 100.0 418
XP_002804713.1 PREDICTED: goliath homolog M. mulatta 100.0 275
XP_003123692.2 PREDICTED: E3 ubiquitin-protein ligase RNF130-like S. scrofa 100.0 274
XP_003900684.1 PREDICTED: E3 ubiquitin-protein ligase RNF130 P. anubis 99.8 487
XP_002721367.1 PREDICTED: ring finger protein 130 O. cuniculus 99.8 429
NP_001093178.1 RNF130 gene product B. taurus 99.8 418
XP_004009163.1 PREDICTED: E3 ubiquitin-protein ligase RNF130 O. aries 99.8 395
XP_531881.3 PREDICTED: E3 ubiquitin-protein ligase RNF130 isoform 1, partial C. lupus familiaris 99.7 347
XP_001497320.3 PREDICTED: e3 ubiquitin-protein ligase RNF130-like E. caballus 99.6 275
NP_067515.2 Rnf130 gene product M. musculus 99.5 418
NP_001032747.1 LOC652955 gene product R. norvegicus 99.5 418
NP_001018301.1 zgc:113271 gene product D. rerio 80.9 356
NP_726508.1 goliath, isoform B D. melanogaster 57.1 238
NP_001084782.1 E3 ubiquitin-protein ligase RNF149 precursor X. laevis 56.0 293
NP_497129.1 Protein H10E21.5 C. elegans 55.6 162
Other hits (2 of 22) [Show all]SpeciesId(%)Len(aa)
XP_001507054.2 PREDICTED: E3 ubiquitin-protein ligase RNF130-like O. anatinus 96.2 342
XP_001381191.2 PREDICTED: e3 ubiquitin-protein ligase RNF130, partial M. domestica 95.6 405

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: mixed; brain; lung; uncharacterized tissue; kidney; connective tissue; parathyroid; pituitary gland; lymph; mammary gland; nerve; prostate; placenta; embryonic tissue; liver; eye; pancreas; intestine; ear; blood; bone; uterus; testis; thyroid; ovary; muscle; mouth; vascular; adrenal gland; skin; tonsil; cervix; stomach; heart; pineal gland; lymph node; bone marrow; ascites; ganglia; umbilical cord; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5q35.3
UniSTS entry: Chr 1 D1S1425
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AY083998.1 Homo sapiens goliath protein mRNA, complete cds PA
BC065244.1 Homo sapiens ring finger protein 130, mRNA (cDNA clone IMAGE:6065399), partial cds PA
BC082267.1 Homo sapiens ring finger protein 130, mRNA (cDNA clone IMAGE:6731754), complete cds PA
AF155650.1 Human mRNA for goliath protein P
AB209800.1 Homo sapiens mRNA for ring finger protein 130 variant protein P
BC108306.1 Homo sapiens ring finger protein 130, mRNA (cDNA clone MGC:117241 IMAGE:6137501), complete cds PA
BC113864.1 Homo sapiens ring finger protein 130, mRNA (cDNA clone MGC:138647 IMAGE:40033418), complete cds P
BC114472.1 Homo sapiens ring finger protein 130, mRNA (cDNA clone IMAGE:40033417), partial cds P
NM_018434.4 Homo sapiens ring finger protein 130 (RNF130), mRNA PA
BC017100.1 Homo sapiens ring finger protein 130, mRNA (cDNA clone IMAGE:3535930), partial cds PA
AK313089.1 Homo sapiens cDNA, FLJ93572, Homo sapiens goliath protein (GP), mRNA P
AL831873.1 Homo sapiens mRNA; cDNA DKFZp547C1510 (from clone DKFZp547C1510) A

EST sequences (10 of 532) [Show all sequences]

AA970287.1 Clone IMAGE:1575238 kidney 3' read
AA987704.1 Clone IMAGE:1593418 kidney 3' read A
AA885942.1 Clone IMAGE:1500572 kidney 3' read P
AA906852.1 Clone IMAGE:1523991 mixed 3' read P
AI024657.1 Clone IMAGE:1641741 testis 3' read A
AI025741.1 Clone IMAGE:1646519 parathyroid 3' read P
AA928622.1 Clone IMAGE:1553008 uncharacterized tissue 3' read
AI081798.1 Clone IMAGE:1662023 mixed 3' read P
AI091031.1 Clone IMAGE:1689739 mixed 3' read
AI092712.1 Clone IMAGE:1683522 parathyroid 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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