> Family with sequence similarity 193, member B (FAM193B)
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UGID:699448     UniGene Hs.484289     Homo sapiens (human)   FAM193B Order cDNA clone, Links
Family with sequence similarity 193, member B (FAM193B)

Human protein-coding gene FAM193B. Represented by 221 ESTs from 139 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 699448 - Hs.484289]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_518137.3 PREDICTED: protein FAM193B isoform 2 P. troglodytes 100.0 821
NP_001177875.1 FAM193B gene product H. sapiens 100.0 821
NP_663357.2 protein FAM193B M. musculus 91.8 777
XP_697699.4 PREDICTED: protein FAM193B D. rerio 57.6 537
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_003900649.1 PREDICTED: LOW QUALITY PROTEIN: protein FAM193B P. anubis 99.3 882
XP_001095406.2 PREDICTED: uncharacterized protein KIAA1931 homolog M. mulatta 99.2 788

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; muscle; uncharacterized tissue; uterus; liver; spleen; thymus; prostate; testis; adipose tissue; intestine; placenta; kidney; lung; mixed; skin; blood; mammary gland; larynx; pancreas; epididymis; eye; thyroid; trachea; stomach; lymph; ascites; heart; connective tissue; cervix; ganglia; bone; ovary; adrenal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5q35.3
UniSTS entry: Chr 5 RH78125 [Map Viewer]
UniSTS entry: Chr 5 MARC_26808-26809:1034278260:1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

BX647587.1 Homo sapiens mRNA; cDNA DKFZp313I142 (from clone DKFZp313I142) PA
AK001266.1 Homo sapiens cDNA FLJ10404 fis, clone NT2RM4000486 P
BC071696.1 Homo sapiens hypothetical protein FLJ10404, mRNA (cDNA clone IMAGE:5491301), partial cds PA
BC086859.1 Homo sapiens cDNA clone IMAGE:5115856 PA
BC008784.2 Homo sapiens hypothetical protein FLJ10404, mRNA (cDNA clone MGC:3427 IMAGE:3626782), complete cds PA
AB067518.1 Homo sapiens mRNA for KIAA1931 protein, partial cds P
AK096032.1 Homo sapiens cDNA FLJ38713 fis, clone KIDNE2006811 P
NM_001190946.1 Homo sapiens family with sequence similarity 193, member B (FAM193B), transcript variant 3, mRNA P
NR_024019.2 Homo sapiens family with sequence similarity 193, member B (FAM193B), transcript variant 2, non-coding RNA PA

EST sequences (10 of 221) [Show all sequences]

AA905570.1 Clone IMAGE:1506245 mixed 3' read
AA993287.1 Clone IMAGE:1623939 embryonic tissue 3' read
AI022311.1 Clone IMAGE:1652258 mixed 3' read
AI039004.1 Clone IMAGE:1657302 embryonic tissue 3' read
AI039634.1 Clone IMAGE:1657700 embryonic tissue 3' read
AI077578.1 Clone IMAGE:1677191 embryonic tissue 3' read A
AI093561.1 Clone IMAGE:1696364 uterus 3' read P
AI140584.1 Clone IMAGE:1653542 mixed 3' read
BX101838.1 Clone IMAGp998A12226_;_IMAGE:148115 placenta
CB151685.1 Clone C1SNU17-38-E05 cervix 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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