> Actin filament associated protein 1-like 1 (AFAP1L1)
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UGID:698952     UniGene Hs.483793     Homo sapiens (human)   AFAP1L1 Order cDNA clone, Links
Actin filament associated protein 1-like 1 (AFAP1L1)

Human protein-coding gene AFAP1L1. Represented by 104 ESTs from 71 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 698952 - Hs.483793]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_689619.1 AFAP1L1 gene product H. sapiens 100.0 767
XP_518027.3 PREDICTED: actin filament associated protein 1-like 1 isoform 2 P. troglodytes 99.7 767
NP_849259.2 Afap1l1 gene product M. musculus 90.1 767
NP_001070755.2 actin filament associated protein 1-like D. rerio 59.1 749
NP_001079952.1 actin filament-associated protein 1-like 2 X. laevis 53.9 141
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
XP_002804621.1 PREDICTED: actin filament-associated protein 1-like 1-like M. mulatta 98.1 724
XP_003900386.1 PREDICTED: actin filament-associated protein 1-like 1 isoform 1 P. anubis 97.9 767

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; brain; uncharacterized tissue; embryonic tissue; kidney; skin; testis; mammary gland; liver; mixed; lung; pancreas; ovary; heart; eye; uterus; intestine; stomach; vascular; thyroid; trachea; mouth; muscle; connective tissue; lymph node; amniotic fluid; salivary gland; prostate; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 5
Map position: 5q32
UniSTS entry: Chr 5 WI-16209 [Map Viewer]
UniSTS entry: Chr 5 D5S2661
UniSTS entry: Chr 5 MARC_11935-11936:1003495836:1
UniSTS entry: Chr 1 STS-AA028117 [Map Viewer]
UniSTS entry: Chr 1 D11S2921
UniSTS entry: Chr 1 GDB:335751
UniSTS entry: Chr 1 SHGC-67307
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

NM_152406.2 Homo sapiens actin filament associated protein 1-like 1 (AFAP1L1), transcript variant 1, mRNA P
BC125093.1 Homo sapiens actin filament associated protein 1-like 1, mRNA (cDNA clone MGC:149772 IMAGE:40118258), complete cds P
BC125094.1 Homo sapiens actin filament associated protein 1-like 1, mRNA (cDNA clone MGC:149773 IMAGE:40118263), complete cds P
AK074185.1 Homo sapiens mRNA for FLJ00258 protein P
AK095980.1 Homo sapiens cDNA FLJ38661 fis, clone HLUNG2001633, weakly similar to Homo sapiens actin filament associated protein (AFAP) mRNA P
AK094067.1 Homo sapiens cDNA FLJ36748 fis, clone UTERU2016896, weakly similar to Homo sapiens actin filament associated protein (AFAP) mRNA P
NM_001146337.1 Homo sapiens actin filament associated protein 1-like 1 (AFAP1L1), transcript variant 2, mRNA P
BC040723.2 Homo sapiens actin filament associated protein 1-like 1, mRNA (cDNA clone IMAGE:6065491), complete cds PA

EST sequences (10 of 104) [Show all sequences]

AA987419.1 Clone IMAGE:1593879 kidney 3' read
AI140064.1 Clone IMAGE:1693728 heart 3' read A
BX094937.1 Clone IMAGp998A2218_;_IMAGE:66333 mixed
AI205152.1 Clone IMAGE:1952550 brain 3' read
AI274654.1 Clone IMAGE:1986458 uterus 3' read A
AI337437.1 Clone IMAGE:2062427 intestine 3' read PA
AI436777.1 Clone IMAGE:2125192 mixed 3' read
AI650828.1 Clone IMAGE:2303895 uncharacterized tissue 3' read A
CB243811.1 Clone UI-CF-FN0-agg-e-13-0-UI lung 3' read A
BX283094.1 Clone IMAGp958A071311_;_IMAGE:4584846 kidney P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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