> Opioid binding protein/cell adhesion molecule-like (OPCML)
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UGID:131557     UniGene Hs.4817     Homo sapiens (human)   OPCML Order cDNA clone, Links
Opioid binding protein/cell adhesion molecule-like (OPCML)

Human protein-coding gene OPCML. Represented by 177 ESTs from 50 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 131557 - Hs.4817]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001012438.1 OPCML gene product P. troglodytes 100.0 344
NP_002536.1 OPCML gene product H. sapiens 100.0 344
NP_808574.2 opioid-binding protein/cell adhesion molecule precursor M. musculus 99.1 336
NP_001086169.1 neurotrimin precursor X. laevis 79.5 322
NP_001005580.1 opcml gene product D. rerio 64.3 333
Other hits (2 of 19) [Show all]SpeciesId(%)Len(aa)
NP_446300.1 Opcml gene product R. norvegicus 99.4 344
XP_003434617.1 PREDICTED: opioid-binding protein/cell adhesion molecule C. lupus familiaris 99.4 344

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; eye; embryonic tissue; connective tissue; testis; parathyroid; kidney; blood; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11q25
UniSTS entry: Chr 11 T03442
UniSTS entry: Chr 11 RH69042
UniSTS entry: Chr 11 WI-9343
UniSTS entry: Chr 11 SHGC-74966
UniSTS entry: Chr 11 RH11938 [Map Viewer]
UniSTS entry: Chr 11 RH12335
UniSTS entry: Chr 11 D11S950E
UniSTS entry: Chr 11 OPCML_366
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (26)

AF070577.1 Homo sapiens clone 24461 mRNA sequence A
L34774.1 Human (clone pHOM) opioid-binding cell adhesion molecule mRNA, complete cds P
BX537377.1 Homo sapiens mRNA; cDNA DKFZp686H1949 (from clone DKFZp686H1949); complete cds PA
AK125185.1 Homo sapiens cDNA FLJ43195 fis, clone FEBRA2002456
NM_002545.3 Homo sapiens opioid binding protein/cell adhesion molecule-like (OPCML), transcript variant 1, mRNA P
BC074773.2 Homo sapiens opioid binding protein/cell adhesion molecule-like, mRNA (cDNA clone MGC:103819 IMAGE:30915200), complete cds P
BC074742.2 Homo sapiens opioid binding protein/cell adhesion molecule-like, mRNA (cDNA clone MGC:104014 IMAGE:30915458), complete cds P
NM_001012393.1 Homo sapiens opioid binding protein/cell adhesion molecule-like (OPCML), transcript variant 2, mRNA P
BC117254.1 Homo sapiens opioid binding protein/cell adhesion molecule-like, mRNA (cDNA clone MGC:150863 IMAGE:40125805), complete cds P
BC126251.1 Homo sapiens opioid binding protein/cell adhesion molecule-like, mRNA (cDNA clone MGC:161529 IMAGE:8991967), complete cds P
AK289695.1 Homo sapiens cDNA FLJ76211 complete cds, highly similar to Homo sapiens opioid binding protein/cell adhesion molecule-like(OPCML), mRNA P
AK314077.1 Homo sapiens cDNA, FLJ94748 P
AK315859.1 Homo sapiens cDNA, FLJ79508 complete cds, highly similar to Opioid-binding protein/cell adhesion moleculeprecursor P
EU562300.1 Homo sapiens opioid binding protein/cell adhesion molecule-like transcript variant 6 mRNA sequence, alternatively spliced P
EU562299.1 Homo sapiens opioid binding protein/cell adhesion molecule-like transcript variant 5 mRNA sequence, alternatively spliced P
EU562298.1 Homo sapiens opioid binding protein/cell adhesion molecule-like transcript variant 4 mRNA sequence, alternatively spliced P
EU562297.1 Homo sapiens opioid binding protein/cell adhesion molecule-like transcript variant 3 mRNA sequence, alternatively spliced P
EU562296.1 Homo sapiens opioid binding protein/cell adhesion molecule-like transcript variant 2 mRNA sequence, alternatively spliced P
EU562295.1 Homo sapiens opioid binding protein/cell adhesion molecule-like transcript variant 1 mRNA sequence, alternatively spliced P
AK299908.1 Homo sapiens cDNA FLJ52276 complete cds, highly similar to Opioid-binding protein/cell adhesion molecule precursor P
AK299528.1 Homo sapiens cDNA FLJ51061 complete cds, highly similar to Opioid-binding protein/cell adhesion molecule precursor P
BC143946.1 Homo sapiens opioid binding protein/cell adhesion molecule-like, mRNA (cDNA clone MGC:177481 IMAGE:9052464), complete cds P
BC143945.1 Homo sapiens opioid binding protein/cell adhesion molecule-like, mRNA (cDNA clone MGC:177480 IMAGE:9052463), complete cds P
AK316491.1 Homo sapiens cDNA, FLJ79390 complete cds, highly similar to Opioid-binding protein/cell adhesion molecule precursor P
AK316273.1 Homo sapiens cDNA, FLJ79172 complete cds, highly similar to Opioid-binding protein/cell adhesion moleculeprecursor P
U79251.1 Human clone 23878 mRNA sequence A

Model sequences (1)

XR_132979.1 PREDICTED: Homo sapiens uncharacterized LOC100653275 (LOC100653275), misc_RNA

EST sequences (10 of 177) [Show all sequences]

R15911.1 Clone IMAGE:53231 brain 3' read A
R15912.1 Clone IMAGE:53231 brain 5' read
R18433.1 Clone IMAGE:31159 brain 5' read
R19744.1 Clone IMAGE:34939 brain 5' read
R24311.1 Clone IMAGE:34186 brain 5' read
BX114456.1 Clone IMAGp998N13159_;_IMAGE:34939 brain A
AI217847.1 Clone IMAGE:1755822 testis 3' read A
R37140.1 Clone IMAGE:25971 brain 3' read A
R37364.1 Clone IMAGE:28375 brain 3' read A
R38201.1 Clone IMAGE:23878 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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