> Ankyrin repeat domain 50 (ANKRD50)
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UGID:695853     UniGene Hs.480694     Homo sapiens (human)   ANKRD50 Order cDNA clone, Links
Ankyrin repeat domain 50 (ANKRD50)

Human protein-coding gene ANKRD50. Represented by 178 ESTs from 98 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 695853 - Hs.480694]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_065070.1 ANKRD50 gene product H. sapiens 100.0 1428
XP_517429.1 PREDICTED: ankyrin repeat domain-containing protein 50 isoform 2 P. troglodytes 99.9 1428
XP_001104758.1 PREDICTED: ankyrin repeat domain-containing protein 50-like M. mulatta 99.5 1428
NP_001161355.1 ankyrin repeat domain 50 M. musculus 93.5 248
NP_651624.2 CG10011 D. melanogaster 58.3 544
XP_696361.2 PREDICTED: ankyrin repeat domain-containing protein 50 D. rerio 55.0 1411
Other hits (2 of 31) [Show all]SpeciesId(%)Len(aa)
XP_003899215.1 PREDICTED: ankyrin repeat domain-containing protein 50 P. anubis 99.4 1249
NP_001192878.1 ankyrin repeat domain-containing protein 50 B. taurus 99.0 1428

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; mixed; muscle; kidney; mammary gland; placenta; uterus; prostate; eye; stomach; connective tissue; lung; uncharacterized tissue; embryonic tissue; pancreas; vascular; ear; blood; bladder; trachea; ascites; nerve; skin; ovary; liver; heart
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4q28.1
UniSTS entry: Chr 4 SHGC-36222
UniSTS entry: Chr 4 STS-R72441 [Map Viewer]
UniSTS entry: Chr 4 D4S3303
UniSTS entry: Chr 4 SHGC-50186
UniSTS entry: Chr 4 RH99075
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AL110131.1 Homo sapiens mRNA; cDNA DKFZp564H122 (from clone DKFZp564H122) A
BX640674.1 Homo sapiens mRNA; cDNA DKFZp686E15142 (from clone DKFZp686E15142) PA
AK127496.1 Homo sapiens cDNA FLJ45589 fis, clone BRTHA3014547, weakly similar to Ankyrin 1 P
AB033049.2 Homo sapiens mRNA for KIAA1223 protein, partial cds P
NM_020337.2 Homo sapiens ankyrin repeat domain 50 (ANKRD50), transcript variant 1, mRNA PA
AK291068.1 Homo sapiens cDNA FLJ78750 complete cds P
BC024725.1 Homo sapiens ankyrin repeat domain 50, mRNA (cDNA clone MGC:30046 IMAGE:4943808), complete cds PA
AK091516.1 Homo sapiens cDNA FLJ34197 fis, clone FCBBF3019455, weakly similar to ANKYRIN 1 P
AK295135.1 Homo sapiens cDNA FLJ58180 complete cds, highly similar to Ankyrin repeat domain-containing protein 50 P
AF075020.1 Homo sapiens full length insert cDNA YI29B01
NM_001167882.1 Homo sapiens ankyrin repeat domain 50 (ANKRD50), transcript variant 2, mRNA PA

EST sequences (10 of 178) [Show all sequences]

AA994997.1 Clone IMAGE:1625768 mixed 3' read A
AI017123.1 Clone IMAGE:1639196 testis 3' read PA
R23227.1 Clone IMAGE:131050 placenta 3' read A
R23302.1 Clone IMAGE:131050 placenta 5' read
AI139985.1 Clone IMAGE:1689906 mixed 3' read A
BX116527.1 Clone IMAGp998I02206_;_IMAGE:140617 placenta A
BX107850.1 Clone IMAGp998A214159_;_IMAGE:1639196 testis
AI214973.1 Clone IMAGE:1883467 lung 3' read A
AI218159.1 Clone IMAGE:1845969 mixed 3' read A
AA723816.1 Clone IMAGE:1326085 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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