> Serine/arginine-rich splicing factor 11 (SRSF11)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:694852     UniGene Hs.479693     Homo sapiens (human)   SRSF11 Order cDNA clone, Links
Serine/arginine-rich splicing factor 11 (SRSF11)

Human protein-coding gene SRSF11. Represented by 966 ESTs from 375 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 694852 - Hs.479693]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_004759.1 SRSF11 gene product H. sapiens 100.0 483
XP_001166106.1 PREDICTED: serine/arginine-rich splicing factor 11 isoform 2 P. troglodytes 100.0 482
XP_001098069.1 PREDICTED: splicing factor, arginine/serine-rich 11 isoform 1 M. mulatta 100.0 481
XP_003892100.1 PREDICTED: serine/arginine-rich splicing factor 11 P. anubis 100.0 481
XP_001498313.2 PREDICTED: serine/arginine-rich splicing factor 11 E. caballus 99.8 417
XP_547337.3 PREDICTED: serine/arginine-rich splicing factor 11 isoform 1 C. lupus familiaris 99.8 414
XP_002715972.1 PREDICTED: splicing factor, arginine/serine-rich 11 O. cuniculus 99.6 484
NP_001069089.1 SRSF11 gene product B. taurus 99.6 481
NP_001087222.1 splicing factor, arginine/serine-rich 11 isoform 1 M. musculus 98.7 475
NP_001089946.1 serine/arginine-rich splicing factor 11 X. laevis 91.4 453
NP_955870.1 srsf11 gene product D. rerio 79.3 458
Other hits (2 of 16) [Show all]SpeciesId(%)Len(aa)
NP_001038052.1 SRSF11 gene product S. scrofa 99.4 482
XP_004002124.1 PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing factor 11 O. aries 99.4 476

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; lung; testis; uterus; placenta; liver; mixed; uncharacterized tissue; prostate; kidney; thymus; eye; skin; parathyroid; trachea; bone marrow; spleen; pituitary gland; pancreas; intestine; adrenal gland; pharynx; mammary gland; larynx; stomach; muscle; salivary gland; ascites; vascular; ovary; lymph node; connective tissue; blood; bladder; heart; thyroid; bone; mouth; ear; cervix; esophagus; adipose tissue; lymph; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p31
UniSTS entry: Chr 1 WI-18827 [Map Viewer]
UniSTS entry: Chr 1 RH39850
UniSTS entry: Chr 1 G34882
UniSTS entry: Chr 1 D1S3538
UniSTS entry: Chr 1 RH69172
UniSTS entry: Chr 1 RH45412
UniSTS entry: Chr 1 RH70428
UniSTS entry: RH11749
UniSTS entry: Chr 1 SFRS11_3927
UniSTS entry: Chr 1 RH118951
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (19)

BX537679.1 Homo sapiens mRNA; cDNA DKFZp686M13204 (from clone DKFZp686M13204) PA
BX641004.1 Homo sapiens mRNA; cDNA DKFZp686D02116 (from clone DKFZp686D02116) PA
BX640645.1 Homo sapiens mRNA; cDNA DKFZp686P22142 (from clone DKFZp686P22142) PA
NM_004768.3 Homo sapiens serine/arginine-rich splicing factor 11 (SRSF11), transcript variant 1, mRNA P
BC002784.2 Homo sapiens splicing factor, arginine/serine-rich 11, mRNA (cDNA clone IMAGE:3615263), partial cds PA
AK311184.1 Homo sapiens cDNA, FLJ18226
AK310666.1 Homo sapiens cDNA, FLJ17708 PA
AK310447.1 Homo sapiens cDNA, FLJ17489 P
AL832279.1 Homo sapiens mRNA; cDNA DKFZp667E0418 (from clone DKFZp667E0418) PA
AK301670.1 Homo sapiens cDNA FLJ52287 complete cds, highly similar to Splicing factor arginine/serine-rich 11 P
AK300147.1 Homo sapiens cDNA FLJ58939 complete cds, highly similar to Splicing factor arginine/serine-rich 11 P
BC032727.1 Homo sapiens splicing factor, arginine/serine-rich 11, mRNA (cDNA clone IMAGE:5532638), partial cds PA
AB062486.1 Homo sapiens OK/SW-cl.33 mRNA, partial cds A
BC022815.1 Homo sapiens, clone IMAGE:4639478, mRNA PA
BC017359.2 Homo sapiens splicing factor, arginine/serine-rich 11, mRNA (cDNA clone IMAGE:5092873), partial cds PA
BC009840.2 Homo sapiens splicing factor, arginine/serine-rich 11, mRNA (cDNA clone IMAGE:3845506), partial cds PA
NM_001190987.1 Homo sapiens serine/arginine-rich splicing factor 11 (SRSF11), transcript variant 2, mRNA P
BC040436.1 Homo sapiens splicing factor, arginine/serine-rich 11, mRNA (cDNA clone MGC:48837 IMAGE:5518580), complete cds PA
M74002.1 Human arginine-rich nuclear protein mRNA, complete cds P

EST sequences (10 of 966) [Show all sequences]

AA905183.1 Clone IMAGE:1507382 mixed 3' read
AA909750.1 Clone IMAGE:1521023 lung 3' read P
AI002238.1 Clone IMAGE:1601385 lung 3' read A
AA927542.1 Clone IMAGE:1552614 uncharacterized tissue 3' read A
AI027393.1 Clone IMAGE:1650129 parathyroid 3' read A
AA923757.1 Clone IMAGE:1543435 mixed 3' read
AI041323.1 Clone IMAGE:1643055 testis 3' read A
AI075888.1 Clone IMAGE:1676375 embryonic tissue 3' read A
AI081534.1 Clone IMAGE:1555730 kidney 3' read A
AI094540.1 Clone IMAGE:1634883 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help