> Recombination signal binding protein for immunoglobulin kappa J region (RBPJ)
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UGID:694555     UniGene Hs.479396     Homo sapiens (human)   RBPJ Order cDNA clone, Links
Recombination signal binding protein for immunoglobulin kappa J region (RBPJ)

Human protein-coding gene RBPJ. Represented by 827 ESTs from 337 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 694555 - Hs.479396]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001166354.1 PREDICTED: recombining binding protein suppressor of hairless isoform 9 P. troglodytes 100.0 499
NP_005340.2 RBPJ gene product H. sapiens 100.0 499
XP_003356932.1 PREDICTED: recombining binding protein suppressor of hairless isoform 3 S. scrofa 100.0 499
XP_004009801.1 PREDICTED: recombining binding protein suppressor of hairless isoform 1 O. aries 100.0 499
NP_001070469.1 RBPJ gene product B. taurus 100.0 486
XP_001084065.1 PREDICTED: recombining binding protein suppressor of hairless isoform 3 M. mulatta 100.0 485
XP_003898607.1 PREDICTED: recombining binding protein suppressor of hairless P. anubis 100.0 485
XP_863791.2 PREDICTED: recombining binding protein suppressor of hairless isoform 6 C. lupus familiaris 100.0 485
XP_001499334.2 PREDICTED: recombining binding protein suppressor of hairless isoform 1 E. caballus 100.0 485
NP_033061.3 Rbpj gene product M. musculus 99.4 525
NP_001084347.1 suppressor of hairless protein homolog X. laevis 98.6 497
NP_942579.2 recombination signal binding protein for immunoglobulin kappa J region a D. rerio 96.8 495
NP_476868.1 suppressor of hairless D. melanogaster 86.7 490
NP_001023278.1 Protein LAG-1, isoform b C. elegans 64.8 483
Other hits (2 of 29) [Show all]SpeciesId(%)Len(aa)
XP_002939143.1 PREDICTED: suppressor of hairless protein homolog X. tropicalis 99.4 486
XP_003428607.1 PREDICTED: suppressor of hairless protein homolog isoform 2 O. anatinus 99.4 485

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; embryonic tissue; placenta; uncharacterized tissue; lung; mixed; uterus; liver; connective tissue; pharynx; eye; thymus; spleen; thyroid; mammary gland; pancreas; stomach; pituitary gland; blood; mouth; muscle; skin; prostate; intestine; kidney; lymph node; cervix; bone marrow; ovary; vascular; bone; lymph; heart; adipose tissue; trachea; adrenal gland; bladder; ear; ascites; salivary gland; nerve; parathyroid; epididymis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4p15.2
UniSTS entry: Chr 4 STS-T67414 [Map Viewer]
UniSTS entry: Chr 4 SHGC-67733 [Map Viewer]
UniSTS entry: Chr 4 SHGC-67732 [Map Viewer]
UniSTS entry: Chr 4 SHGC-64083
UniSTS entry: Chr 4 SHGC-67311
UniSTS entry: Rbpsuh-rs3
UniSTS entry: Chr 4 SHGC-59196 [Map Viewer]
UniSTS entry: Chr 4 SHGC-133079
UniSTS entry: Chr 4 RBPSUH_4000
UniSTS entry: Chr 9 RH35837
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

BC053568.1 Homo sapiens cDNA clone IMAGE:6204982, containing frame-shift errors PA
BC053531.1 Homo sapiens recombining binding protein suppressor of hairless (Drosophila), mRNA (cDNA clone IMAGE:3874812), partial cds PA
NM_005349.3 Homo sapiens recombination signal binding protein for immunoglobulin kappa J region (RBPJ), transcript variant 1, mRNA PA
BC064976.1 Homo sapiens recombination signal binding protein for immunoglobulin kappa J region, mRNA (cDNA clone MGC:70941 IMAGE:6152924), complete cds PA
NM_203283.2 Homo sapiens recombination signal binding protein for immunoglobulin kappa J region (RBPJ), transcript variant 3, mRNA PA
NM_203284.2 Homo sapiens recombination signal binding protein for immunoglobulin kappa J region (RBPJ), transcript variant 4, mRNA PA
NM_015874.4 Homo sapiens recombination signal binding protein for immunoglobulin kappa J region (RBPJ), transcript variant 2, mRNA PA
AK311419.1 Homo sapiens cDNA, FLJ18461 P
AK302230.1 Homo sapiens cDNA FLJ50914 complete cds, highly similar to Recombining binding protein suppressor of hairless P
BC020780.1 Homo sapiens recombination signal binding protein for immunoglobulin kappa J region, mRNA (cDNA clone MGC:22780 IMAGE:4718839), complete cds PA
L07872.1 Homo sapiens recombination signal binding protein (RBPJK) mRNA, partial cds P
AF086058.1 Homo sapiens full length insert cDNA clone YY93G09 A
Z36843.1 H.sapiens (xs86) mRNA, 314bp
L07876.1 Human Jk-recombination signal binding protein (RBPJK) mRNA exons 2-3, 5' end
L07875.1 Human Jk-recombination signal binding protein (RBPJK) mRNA exons 1-3, 5' end
AK303244.1 Homo sapiens cDNA FLJ56276 complete cds, highly similar to Recombining binding protein suppressor of hairless P

EST sequences (10 of 827) [Show all sequences]

AA969666.1 Clone IMAGE:1579193 mixed 3' read
AA973809.1 Clone IMAGE:1569189 lung 3' read
R16902.1 Clone IMAGE:129725 mixed 3' read
AI016749.1 Clone IMAGE:1638521 testis 3' read A
AI023923.1 Clone IMAGE:1652109 mixed 3' read
AI027092.1 Clone IMAGE:1649759 parathyroid 3' read
AI095803.1 Clone IMAGE:1696848 uterus 3' read
AA902382.1 Clone IMAGE:1521602 lung 3' read A
AI125773.1 Clone IMAGE:1737246 testis 3' read A
AI144435.1 Clone IMAGE:1708878 heart 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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