> Small integral membrane protein 20 (SMIM20)
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UGID:694545     UniGene Hs.479386     Homo sapiens (human)   SMIM20 Links
Small integral membrane protein 20 (SMIM20)

Human protein-coding gene SMIM20. Represented by 185 ESTs from 104 cDNA libraries. Corresponds to reference sequence NM_001145432.1. [UniGene 694545 - Hs.479386]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001175267.2 PREDICTED: uncharacterized protein C4orf52 homolog P. troglodytes 100.0 108
Other hits (2 of 3) [Show all]SpeciesId(%)Len(aa)
XP_001084226.2 PREDICTED: uncharacterized protein C4orf52-like M. mulatta 92.4 91
XP_003919047.1 PREDICTED: uncharacterized protein C4orf52-like P. anubis 85.9 91

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uncharacterized tissue; kidney; pancreas; ovary; bone marrow; mammary gland; mixed; liver; ear; adrenal gland; blood; muscle; pharynx; connective tissue; embryonic tissue; uterus; lung; testis; lymph node; thyroid; bone; placenta; prostate; skin; intestine; eye; tonsil; parathyroid; heart; vascular
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 4
Map position: 4p15.2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BC046171.2 Homo sapiens hypothetical gene supported by BC032431, mRNA (cDNA clone IMAGE:3453987) PA
BC062747.1 Homo sapiens hypothetical gene supported by BC032431, mRNA (cDNA clone IMAGE:6454026) PA
BC086307.1 Homo sapiens hypothetical gene supported by BC032431, mRNA (cDNA clone IMAGE:4855921) PA
BC006003.1 Homo sapiens hypothetical protein LOC389203, mRNA (cDNA clone IMAGE:4247529), partial cds PA
BC032431.1 Homo sapiens hypothetical protein LOC389203, mRNA (cDNA clone IMAGE:4521185), partial cds PA
BC014348.1 Homo sapiens hypothetical protein LOC389203, mRNA (cDNA clone IMAGE:4052356), with apparent retained intron PA
NM_001145432.1 Homo sapiens chromosome 4 open reading frame 52 (C4orf52), mRNA P
BC040154.1 Homo sapiens hypothetical gene supported by BC032431, mRNA (cDNA clone IMAGE:3861979) PA

EST sequences (10 of 185) [Show all sequences]

AI039466.1 Clone IMAGE:1658862 embryonic tissue 3' read
AI040159.1 Clone IMAGE:1658971 embryonic tissue 3' read A
AI041494.1 Clone IMAGE:1648850 parathyroid 3' read
AI051814.1 Clone IMAGE:1648427 parathyroid 3' read A
AI057283.1 Clone IMAGE:1669684 brain 3' read A
AA946659.1 Clone IMAGE:1589152 kidney 3' read
AI073547.1 Clone IMAGE:1640288 testis 3' read
AI090349.1 Clone IMAGE:1666165 skin 3' read
AI138700.1 Clone IMAGE:1710434 uterus 3' read
CB049464.1 Clone IMAGE:3271222 prostate 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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