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UGID:692520     UniGene Hs.477361     Homo sapiens (human)   SEC22A
SEC22 vesicle trafficking protein homolog A (S. cerevisiae) (SEC22A)

Human protein-coding gene SEC22A. Represented by 240 ESTs from 130 cDNA libraries. Corresponds to reference sequence NM_012430.4. [UniGene 692520 - Hs.477361]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003339095.1 PREDICTED: vesicle-trafficking protein SEC22a P. troglodytes 100.0 306
NP_036562.2 SEC22A gene product H. sapiens 100.0 306
XP_001112957.1 PREDICTED: vesicle-trafficking protein SEC22a-like isoform 3 M. mulatta 99.7 306
XP_003894068.1 PREDICTED: vesicle-trafficking protein SEC22a isoform 1 P. anubis 99.7 306
NP_598465.2 Sec22a gene product M. musculus 97.7 306
NP_001086881.1 SEC22 vesicle trafficking protein-like 2 X. laevis 80.5 301
NP_955992.1 sec22a gene product D. rerio 75.2 302
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_002716663.1 PREDICTED: SEC22 vesicle trafficking protein homolog A O. cuniculus 99.0 306
XP_001501980.1 PREDICTED: vesicle-trafficking protein SEC22a-like E. caballus 98.4 306

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; testis; lung; embryonic tissue; liver; esophagus; heart; pharynx; muscle; mammary gland; bladder; blood; pancreas; prostate; ovary; vascular; mouth; uterus; uncharacterized tissue; skin; stomach; spleen; trachea; thymus; placenta; connective tissue; tonsil; intestine; kidney; parathyroid; eye; ascites; bone; lymph node; cervix; salivary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3q21.1
UniSTS entry: Chr 3 MARC_17489-17490:1016467909:1
UniSTS entry: Chr 3 SHGC-77272 [Map Viewer]
UniSTS entry: Chr 3 WI-20424 [Map Viewer]
UniSTS entry: Chr 3 SGC34688 [Map Viewer]
UniSTS entry: Chr 3 STS-H48436 [Map Viewer]
UniSTS entry: Chr 3 SHGC-77275 [Map Viewer]
UniSTS entry: Chr 1 D1S1425
UniSTS entry: Chr 1 GDB:313261
UniSTS entry: Chr 1 D17S1136
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

NM_012430.4 Homo sapiens SEC22 vesicle trafficking protein homolog A (S. cerevisiae) (SEC22A), mRNA P
BC007122.1 Homo sapiens SEC22 vesicle trafficking protein homolog A (S. cerevisiae), mRNA (cDNA clone MGC:4981 IMAGE:3459649), complete cds PA
AK057587.1 Homo sapiens cDNA FLJ33025 fis, clone THYMU1000558, highly similar to Homo sapiens SEC22 vesicle trafficking protein-like 2 (S. cerevisiae) (SEC22L2), mRNA P
AK315771.1 Homo sapiens cDNA, FLJ96885, Homo sapiens SEC22 vesicle trafficking protein-like 2 (S.cerevisiae) (SEC22L2), mRNA P
AF100749.1 Homo sapiens Sec22 homolog mRNA, complete cds P

EST sequences (10 of 240) [Show all sequences]

AA987204.1 Clone IMAGE:1603289 lung 3' read
AA988478.1 Clone IMAGE:1602993 lung 3' read
AI022949.1 Clone IMAGE:1651836 skin 3' read
AI027243.1 Clone IMAGE:1644457 testis 3' read A
R19437.1 Clone IMAGE:33579 brain 5' read
AI075806.1 Clone IMAGE:1674739 mixed 3' read A
AI077575.1 Clone IMAGE:1677183 embryonic tissue 3' read A
AI079239.1 Clone IMAGE:1678954 skin 3' read A
AI147873.1 Clone IMAGE:1698123 uterus 3' read A
BX116818.1 Clone IMAGp998L221855_;_IMAGE:754725 mixed P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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