> Catenin (cadherin-associated protein), beta 1, 88kDa (CTNNB1)
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UGID:691177     UniGene Hs.476018     Homo sapiens (human)   CTNNB1 Order cDNA clone, Links
Catenin (cadherin-associated protein), beta 1, 88kDa (CTNNB1)

Human protein-coding gene CTNNB1. Represented by 1173 ESTs from 340 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 691177 - Hs.476018]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001159374.1 Ctnnb1 gene product M. musculus 100.0 780
NP_445809.2 Ctnnb1 gene product R. norvegicus 100.0 780
XP_001369277.1 PREDICTED: catenin beta-1-like M. domestica 100.0 780
XP_003224002.1 PREDICTED: catenin beta-1-like A. carolinensis 100.0 780
XP_002199072.1 PREDICTED: catenin beta-1 T. guttata 100.0 780
XP_002802884.1 PREDICTED: catenin beta-1 isoform 2 M. mulatta 100.0 780
XP_003894668.1 PREDICTED: catenin beta-1 isoform 1 P. anubis 100.0 780
XP_001138023.1 PREDICTED: catenin beta-1 isoform 10 P. troglodytes 100.0 780
NP_001091680.1 CTNNB1 gene product H. sapiens 100.0 780
NP_001131124.1 CTNNB1 gene product C. lupus familiaris 100.0 780
NP_001116234.1 CTNNB1 gene product E. caballus 100.0 780
NP_999532.1 CTNNB1 gene product S. scrofa 100.0 780
NP_001069609.1 CTNNB1 gene product B. taurus 100.0 780
XP_004018292.1 PREDICTED: catenin beta-1 isoform 1 O. aries 100.0 780
XP_002713121.1 PREDICTED: beta-catenin O. cuniculus 100.0 780
XP_003207299.1 PREDICTED: catenin beta-1-like M. gallopavo 99.9 791
NP_990412.1 CTNNB1 gene product G. gallus 99.9 780
NP_001084045.1 catenin beta X. laevis 99.4 780
NP_571134.2 ctnnb1 gene product D. rerio 99.1 779
NP_476666.1 armadillo, isoform A D. melanogaster 80.2 814
Other hits (2 of 24) [Show all]SpeciesId(%)Len(aa)
NP_001016958.1 ctnnb1 gene product X. tropicalis 99.5 780
NP_001167409.1 Catenin beta-1 S. salar 99.4 779

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; mouth; trachea; intestine; uterus; embryonic tissue; thymus; placenta; mammary gland; uncharacterized tissue; connective tissue; kidney; lung; adrenal gland; bone marrow; heart; larynx; liver; ovary; lymph node; thyroid; spleen; amniotic fluid; spinal cord; skin; prostate; muscle; bladder; vascular; stomach; pharynx; eye; blood; mixed; ear; salivary gland; lymph; ascites; pancreas; bone; umbilical cord; esophagus; cervix; pituitary gland; epididymis; nerve
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3p21
UniSTS entry: Chr 3 PMC123056P1
UniSTS entry: Chr 3 PMC15782P2
UniSTS entry: Chr 3 PMC130963P2
UniSTS entry: GDB:435507
UniSTS entry: Chr 3 EST12H1
UniSTS entry: Chr 3 PMC15782P1
UniSTS entry: Chr 3 Ctnnb1
UniSTS entry: Chr 3 G42968
UniSTS entry: Ctnnb1
UniSTS entry: STS-R60044
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (14)

BC058926.1 Homo sapiens catenin (cadherin-associated protein), beta 1, 88kDa, mRNA (cDNA clone MGC:65131 IMAGE:6151332), complete cds PA
NM_001904.3 Homo sapiens catenin (cadherin-associated protein), beta 1, 88kDa (CTNNB1), transcript variant 1, mRNA P
Z19054.1 H.sapiens of beta catenin gene P
NM_001098209.1 Homo sapiens catenin (cadherin-associated protein), beta 1, 88kDa (CTNNB1), transcript variant 2, mRNA P
NM_001098210.1 Homo sapiens catenin (cadherin-associated protein), beta 1, 88kDa (CTNNB1), transcript variant 3, mRNA P
AK289932.1 Homo sapiens cDNA FLJ78465 complete cds, highly similar to Homo sapiens catenin (cadherin-associated protein), beta 1, 88kDa (CTNNB1), mRNA P
AK314776.1 Homo sapiens cDNA, FLJ95646 P
AB062292.1 Homo sapiens OK/SW-cl.35 mRNA for catenin beta 1, complete cds PA
AK299954.1 Homo sapiens cDNA FLJ59415 complete cds, highly similar to Beta-catenin P
AK296790.1 Homo sapiens cDNA FLJ59565 complete cds, highly similar to Beta-catenin P
AK294778.1 Homo sapiens cDNA FLJ57878 complete cds, highly similar to Beta-catenin P
AB451392.1 Homo sapiens CTNNB1 mRNA for catenin beta-1, partial cds, clone: FLJ08084AAAF P
AB451264.1 Homo sapiens CTNNB1 mRNA for catenin beta-1, complete cds, clone: FLJ08084AAAN P
X87838.1 H.sapiens mRNA for beta-catenin P

EST sequences (10 of 1173) [Show all sequences]

AI017314.1 Clone IMAGE:1638957 testis 3' read A
CB049853.1 Clone IMAGE:3271774 prostate 3' read A
BX097164.1 Clone IMAGp998K09177_;_IMAGE:42816 brain A
BX101268.1 Clone IMAGp998G022041_;_IMAGE:826009 lymph node
CB163114.1 Clone L18POOL1n1-46-F05 liver 5' read P
CB108972.1 Clone L6ChoCK0-1-C06 liver 5' read P
AI272106.1 Clone IMAGE:1866126 kidney 3' read A
CB151901.1 Clone C1SNU17-24-H12 cervix 5' read P
AA888490.1 Clone IMAGE:1252392 bone A
AA888509.1 Clone IMAGE:1252417 bone A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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