BEN domain containing 5 (BEND5)

Restricted Expression:

larynx [show more like this]

EST Profile:

Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]

GEO Profiles:

Experimental gene expression data (Gene Expression Omnibus).

cDNA Sources:

larynx; connective tissue; brain; eye; lung; mixed; spleen; uncharacterized tissue; esophagus; heart; embryonic tissue; tonsil; pancreas; bone; uterus; testis; lymph node; prostate; ear; parathyroid

NCBI

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Finding cDNAs

UGID:690507 UniGene Hs.475348 Homo sapiens (human) BEND5

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BEN domain containing 5 (BEND5)

Human protein-coding gene BEND5. Represented by 192 ESTs from 43 cDNA libraries. EST representation biased toward larynx. Corresponds to reference sequence NM_024603.2. [UniGene 690507 - Hs.475348]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_001110366.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: BEN domain-containing protein 5-like isoform 1	M. mulatta	100.0	420
XP_003891903.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: BEN domain-containing protein 5	P. anubis	100.0	420
XP_001164459.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: LOW QUALITY PROTEIN: BEN domain-containing protein 5 isoform 2	P. troglodytes	100.0	420
NP_078879.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	BEND5 gene product	H. sapiens	100.0	420
XP_002715155.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: BEN domain containing 5	O. cuniculus	99.8	420
XP_532587.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: BEN domain-containing protein 5 isoform 1	C. lupus familiaris	99.7	335
NP_080555.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Bend5 gene product	M. musculus	99.5	420
NP_001089788.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	BEN domain-containing protein 5	X. laevis	79.6	392
Other hits (2 of 10) [Show all]		Species	Id(%)	Len(aa)
XP_004002000.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: BEN domain-containing protein 5	O. aries	99.4	335
NP_001102142.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	BEN domain-containing protein 5	R. norvegicus	99.0	420

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	1
Map position:	1p33
UniSTS entry:	Chr 1	SHGC-74765	[Map Viewer]

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AK021650.1	Homo sapiens cDNA FLJ11588 fis, clone HEMBA1003729	P
NM_024603.2	Homo sapiens BEN domain containing 5 (BEND5), mRNA	PA
BC007932.2	Homo sapiens BEN domain containing 5, mRNA (cDNA clone MGC:14179 IMAGE:4121760), complete cds	PA
BC011804.2	Homo sapiens BEN domain containing 5, mRNA (cDNA clone MGC:19478 IMAGE:4336159), complete cds	PA
AK055449.1	Homo sapiens cDNA FLJ30887 fis, clone FEBRA2005036	P
AK096573.1	Homo sapiens cDNA FLJ39254 fis, clone OCBBF2008775

EST sequences (10 of 192) [Show all sequences]

AA993547.1	Clone IMAGE:1623235	embryonic tissue	3' read	PA
BX096297.1	Clone IMAGp998N025564_;_IMAGE:2248513	prostate		A
AI217582.1	Clone IMAGE:1732266	heart	3' read	A
AI242290.1	Clone IMAGE:1856688	mixed	3' read	PA
AI305211.1	Clone IMAGE:1879601	mixed	3' read	PA
AI332347.1	Clone IMAGE:1931885	mixed	3' read	PA
AI378659.1	Clone IMAGE:2068689	mixed	3' read	PA
AI493680.1	Clone IMAGE:2019932	brain	3' read	P
R49555.1	Clone IMAGE:38344	brain	3' read	A
AI659592.1	Clone IMAGE:2248513	prostate	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria