Chromosome 1 open reading frame 87 (C1orf87)

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UGID:137558 UniGene Hs.47385 Homo sapiens (human) C1orf87

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Chromosome 1 open reading frame 87 (C1orf87)

Human protein-coding gene C1orf87. Represented by 27 ESTs from 16 cDNA libraries. Corresponds to reference sequence NM_152377.2. [UniGene 137558 - Hs.47385]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
NP_689590.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	C1orf87 gene product	H. sapiens	100.0	545
NP_001074753.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Gm12695 gene product	M. musculus	65.5	544
Other hits (2 of 10) [Show all]		Species	Id(%)	Len(aa)
XP_513446.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein C1orf87 homolog	P. troglodytes	99.5	545
XP_001083212.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein C1orf87-like	M. mulatta	94.5	545

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	testis; brain; lung; pharynx; mixed; connective tissue; uterus

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	1
	Map position:	1p32.1

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

BC042203.1	Homo sapiens chromosome 1 open reading frame 87, mRNA (cDNA clone IMAGE:5172151), complete cds	PA
AK126061.1	Homo sapiens cDNA FLJ44073 fis, clone TESTI4038223	P
AK124828.1	Homo sapiens cDNA FLJ42838 fis, clone BRCAN2021028	P
BC027878.1	Homo sapiens chromosome 1 open reading frame 87, mRNA (cDNA clone MGC:34837 IMAGE:5207590), complete cds	PA
NM_152377.2	Homo sapiens chromosome 1 open reading frame 87 (C1orf87), mRNA	PA

EST sequences (10 of 27) [Show all sequences]

AA906694.1	Clone IMAGE:1521773	lung	3' read	A
AI015082.1	Clone IMAGE:1640874	testis	3' read
AI858998.1	Clone IMAGE:2426589	uterus	3' read	PA
CD703175.1		pharynx		P
CD707889.1		pharynx		P
CR749041.1	Clone IMAGp998H0311428_;_IMAGE:5172146	brain	5' read	P
DA267375.1	Clone BRCAN2021028	brain	5' read	P
DA280081.1	Clone BRCOC2008355	brain	5' read	P
DA591571.1	Clone HLUNG2013803	lung	5' read	P
DB341324.1	Clone TESTI4038223	testis	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria