> URB1 ribosome biogenesis 1 homolog (S. cerevisiae) (URB1)
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UGID:688770     UniGene Hs.473611     Homo sapiens (human)   URB1 Links
URB1 ribosome biogenesis 1 homolog (S. cerevisiae) (URB1)

Human protein-coding gene URB1. Represented by 154 ESTs from 87 cDNA libraries. Corresponds to reference sequence NM_014825.2. [UniGene 688770 - Hs.473611]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_055640.2 URB1 gene product H. sapiens 100.0 2270
NP_083773.1 nucleolar pre-ribosomal-associated protein 1 M. musculus 79.1 2276
NP_001081372.1 structural maintenance of chromosomes protein 2 X. laevis 77.8 117
XP_003200056.1 PREDICTED: nucleolar pre-ribosomal-associated protein 1-like, partial D. rerio 55.8 1126
Other hits (2 of 20) [Show all]SpeciesId(%)Len(aa)
XP_531425.3 PREDICTED: nucleolar pre-ribosomal-associated protein 1 P. troglodytes 99.2 2270
XP_003895584.1 PREDICTED: nucleolar pre-ribosomal-associated protein 1 P. anubis 96.3 2270

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; lymph; ovary; ascites; brain; mouth; skin; liver; heart; cervix; thyroid; prostate; embryonic tissue; pancreas; intestine; uterus; uncharacterized tissue; lung; mixed; testis; eye; muscle; mammary gland; bone; ganglia; vascular; blood; thymus; kidney
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 21
Map position: 21q22.11
UniSTS entry: Chr 21 SHGC-87585 [Map Viewer]
UniSTS entry: AA670781
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

BC062356.1 Homo sapiens cDNA clone IMAGE:4551972, partial cds PA
AF231919.1 Homo sapiens chromosome 21 C21orf108 mRNA, partial cds P
NM_014825.2 Homo sapiens URB1 ribosome biogenesis 1 homolog (S. cerevisiae) (URB1), mRNA P
AF432264.1 Homo sapiens KIAA0539 protein mRNA, partial cds P
BC041033.1 Homo sapiens, clone IMAGE:4643306, mRNA PA
AB011111.2 Homo sapiens mRNA for KIAA0539 protein, partial cds P

EST sequences (10 of 154) [Show all sequences]

AA995988.1 Clone IMAGE:1605284 lung 3' read A
BX092282.1 Clone IMAGp998D04289_;_IMAGE:163539 brain P
AI206963.1 Clone IMAGE:1942424 uncharacterized tissue 3' read A
AI291028.1 Clone IMAGE:1881373 lung 3' read A
AI336057.1 Clone IMAGE:1951396 lung 3' read PA
AI375622.1 Clone IMAGE:2043505 brain 3' read A
AI417108.1 Clone IMAGE:2114945 mixed 3' read A
AI420448.1 Clone IMAGE:2095511 prostate 3' read A
AI423709.1 Clone IMAGE:2098075 brain 3' read A
AI431607.1 Clone IMAGE:2114512 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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