> Laminin, alpha 5 (LAMA5)
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UGID:688415     UniGene Hs.473256     Homo sapiens (human)   LAMA5 Links
Laminin, alpha 5 (LAMA5)

Human protein-coding gene LAMA5. Represented by 482 ESTs from 216 cDNA libraries. Corresponds to reference sequence NM_005560.3. [UniGene 688415 - Hs.473256]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_005551.3 LAMA5 gene product H. sapiens 100.0 3694
NP_001074640.1 Lama5 gene product M. musculus 84.2 3691
NP_001034260.1 lama5 gene product D. rerio 58.9 3656
NP_476617.1 laminin A D. melanogaster 53.9 1999
NP_001255501.1 Protein EPI-1, isoform d C. elegans 49.6 2028
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
XP_003954422.1 PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 P. troglodytes 97.4 1732
XP_003904574.1 PREDICTED: LOW QUALITY PROTEIN: laminin subunit alpha-5 P. anubis 97.2 3693

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; mixed; pancreas; lung; placenta; ovary; uncharacterized tissue; prostate; cervix; intestine; uterus; nerve; eye; testis; mammary gland; mouth; adrenal gland; spleen; thymus; bladder; trachea; epididymis; kidney; connective tissue; ascites; liver; esophagus; thyroid; skin; amniotic fluid; heart; stomach; ganglia; vascular; lymph node; larynx; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 20
Map position: 20q13.2-q13.3
UniSTS entry: Chr 20 RH17482 [Map Viewer]
UniSTS entry: Chr 20 SHGC-58297
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

BC085017.1 Homo sapiens laminin, alpha 5, mRNA (cDNA clone IMAGE:6651170), complete cds PA
NM_005560.3 Homo sapiens laminin, alpha 5 (LAMA5), mRNA P
AK074307.1 Homo sapiens cDNA FLJ23727 fis, clone HEP14228, highly similar to H.sapiens mRNA for laminin alpha 5 chain PA
AF443072.1 Homo sapiens laminin alpha5 chain precursor, mRNA, complete cds P
AB067494.1 Homo sapiens mRNA for KIAA1907 protein, partial cds P
AB010099.1 Homo sapiens mRNA for laminin alpha 5 chain, partial cds P
Z95636.1 H.sapiens mRNA for laminin alpha 5 chain PA
AB011105.1 Homo sapiens mRNA for KIAA0533 protein, partial cds P

EST sequences (10 of 482) [Show all sequences]

AI015624.1 Clone IMAGE:1638782 testis 3' read
AI017079.1 Clone IMAGE:1627905 mixed 3' read
AI026737.1 Clone IMAGE:1644708 testis 3' read A
AI056592.1 Clone IMAGE:1674950 mixed 3' read A
AI091856.1 Clone IMAGE:1690977 mixed 3' read P
BX095340.1 Clone IMAGp998F15783_;_IMAGE:342926 heart P
BX111979.1 Clone IMAGp998E11979_;_IMAGE:418162 mixed
AI184933.1 Clone IMAGE:1509142 mixed 3' read PA
AI215466.1 Clone IMAGE:1844046 mixed 3' read
AI270292.1 Clone IMAGE:1979031 stomach 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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