> Transient receptor potential cation channel, subfamily M, member 3 (TRPM3)
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UGID:137536     UniGene Hs.47288     Homo sapiens (human)   TRPM3 Links
Transient receptor potential cation channel, subfamily M, member 3 (TRPM3)

Human protein-coding gene TRPM3. Represented by 80 ESTs from 38 cDNA libraries. Corresponds to 9 reference sequences (different isoforms). [UniGene 137536 - Hs.47288]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001007472.2 TRPM3 gene product H. sapiens 100.0 1706
XP_001140619.1 PREDICTED: transient receptor potential cation channel subfamily M member 3 isoform 8 P. troglodytes 99.9 1706
XP_002800180.1 PREDICTED: transient receptor potential cation channel subfamily M member 3 isoform 2 M. mulatta 99.7 1706
NP_001030317.1 transient receptor potential cation channel, subfamily M, member 3 isoform b M. musculus 98.7 1720
XP_694167.4 PREDICTED: transient receptor potential cation channel subfamily M member 3 D. rerio 89.1 1693
NP_001177950.1 transient receptor potential cation channel, subfamily M, member 7 X. laevis 62.8 1281
NP_001036548.1 trpm, isoform B D. melanogaster 54.6 1100
NP_001122507.1 Protein GON-2, isoform d C. elegans 53.2 841
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
XP_003432660.1 PREDICTED: transient receptor potential cation channel subfamily M member 3 C. lupus familiaris 99.2 1706
XP_002708247.1 PREDICTED: transient receptor potential cation channel, subfamily M, member 3-like isoform 6 O. cuniculus 99.1 1706

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: eye; brain; embryonic tissue; mixed; uncharacterized tissue; mouth; prostate; thyroid; kidney; pituitary gland; testis; connective tissue; skin; spinal cord; blood
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 9
Map position: 9q21.12
UniSTS entry: Chr 11 D10Bir17
UniSTS entry: Chr 1 D11S3114
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (34)

AB099665.1 Homo sapiens mRNA for hypothetical protein, complete cds, clone: pFCP161632 P
AB099664.1 Homo sapiens mRNA for hypothetical protein, complete cds, clone: pFCP161626 P
AB099663.1 Homo sapiens mRNA for hypothetical protein, complete cds, clone: pFCP161638 P
AB099662.1 Homo sapiens mRNA for hypothetical protein, complete cds, clone: pFCP161643 P
AB099661.1 Homo sapiens mRNA for hypothetical protein, complete cds, clone: pFCP161615 P
NM_020952.4 Homo sapiens transient receptor potential cation channel, subfamily M, member 3 (TRPM3), transcript variant 1, mRNA PA
AF536753.1 Homo sapiens calcium-permeable store-operated channel TRPM3f mRNA, complete cds; alternatively spliced P
AF536752.1 Homo sapiens calcium-permeable store-operated channel TRPM3e mRNA, complete cds; alternatively spliced P
AF536751.1 Homo sapiens calcium-permeable store-operated channel TRPM3d mRNA, complete cds; alternatively spliced P
AF536750.1 Homo sapiens calcium-permeable store-operated channel TRPM3c mRNA, complete cds; alternatively spliced P
AF536749.1 Homo sapiens calcium-permeable store-operated channel TRPM3b mRNA, complete cds; alternatively spliced P
AF536748.1 Homo sapiens calcium-permeable store-operated channel TRPM3a mRNA, complete cds; alternatively spliced P
AJ505026.1 Homo sapiens mRNA for long transient receptor potential channel 3 (TRPM3 gene) PA
BC067733.1 Homo sapiens transient receptor potential cation channel, subfamily M, member 3, mRNA (cDNA clone IMAGE:5277420), partial cds PA
NM_206948.2 Homo sapiens transient receptor potential cation channel, subfamily M, member 3 (TRPM3), transcript variant 7, mRNA PA
NM_206947.3 Homo sapiens transient receptor potential cation channel, subfamily M, member 3 (TRPM3), transcript variant 6, mRNA PA
NM_206946.3 Homo sapiens transient receptor potential cation channel, subfamily M, member 3 (TRPM3), transcript variant 5, mRNA PA
NM_206945.3 Homo sapiens transient receptor potential cation channel, subfamily M, member 3 (TRPM3), transcript variant 4, mRNA PA
NM_206944.3 Homo sapiens transient receptor potential cation channel, subfamily M, member 3 (TRPM3), transcript variant 3, mRNA PA
AJ505025.1 Homo sapiens mRNA for long transient receptor potential channel 3 (TRPM3 gene), splice variant longer variant PA
NM_001007471.2 Homo sapiens transient receptor potential cation channel, subfamily M, member 3 (TRPM3), transcript variant 9, mRNA PA
NM_001007470.1 Homo sapiens transient receptor potential cation channel, subfamily M, member 3 (TRPM3), transcript variant 8, mRNA PA
BC094699.1 Homo sapiens transient receptor potential cation channel, subfamily M, member 3, mRNA (cDNA clone IMAGE:30716887), complete cds PA
AB046836.1 Homo sapiens mRNA for KIAA1616 protein, partial cds P
AK021788.1 Homo sapiens cDNA FLJ11726 fis, clone HEMBA1005367, weakly similar to Homo sapiens melastatin 1 (MLSN1) mRNA P
AL136545.1 Homo sapiens mRNA; cDNA DKFZp761A19121 (from clone DKFZp761A19121) PA
AF325212.1 Homo sapiens melastatin 2 (MLSN2) mRNA, partial cds PA
AK225732.1 Homo sapiens mRNA for Melastatin 2 variant, clone: TST02376 PA
NM_024971.5 Homo sapiens transient receptor potential cation channel, subfamily M, member 3 (TRPM3), transcript variant 2, mRNA PA
BC121821.1 Homo sapiens transient receptor potential cation channel, subfamily M, member 3, mRNA (cDNA clone IMAGE:40109237), complete cds P
BC134414.1 Homo sapiens transient receptor potential cation channel, subfamily M, member 3, mRNA (cDNA clone IMAGE:40109229), complete cds P
BC142972.1 Homo sapiens transient receptor potential cation channel, subfamily M, member 3, mRNA (cDNA clone IMAGE:8860394), complete cds PA
BC022454.2 Homo sapiens transient receptor potential cation channel, subfamily M, member 3, mRNA (cDNA clone IMAGE:4817012), partial cds PA
AK308682.1 Homo sapiens cDNA, FLJ98723 P

EST sequences (10 of 80) [Show all sequences]

AA993175.1 Clone IMAGE:1624296 embryonic tissue 3' read A
AI079920.1 Clone IMAGE:1659889 embryonic tissue 3' read A
BX095091.1 Clone IMAGp998P024212_;_IMAGE:1659889 embryonic tissue P
AI369976.1 Clone IMAGE:2049163 embryonic tissue 3' read A
AI370860.1 Clone IMAGE:2048789 embryonic tissue 3' read A
BX283167.1 Clone IMAGp958B211726 skin 5' read P
CD000159.1 Clone IMAGE:30324083 mixed 5' read P
CD000258.1 Clone IMAGE:30323621 mixed 5' read P
CD000778.1 Clone IMAGE:30324988 mixed 5' read
CD104154.1 Clone IMAGE:30371835 mixed 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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