> Cell cycle associated protein 1 (CAPRIN1)
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UGID:686977     UniGene Hs.471818     Homo sapiens (human)   CAPRIN1 Order cDNA clone, Links
Cell cycle associated protein 1 (CAPRIN1)

Human protein-coding gene CAPRIN1. Represented by 1686 ESTs from 473 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 686977 - Hs.471818]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003910101.1 PREDICTED: caprin-1 isoform 1 P. anubis 100.0 708
NP_005889.3 CAPRIN1 gene product H. sapiens 100.0 708
XP_001115730.1 PREDICTED: caprin-1-like M. mulatta 100.0 627
XP_001146918.1 PREDICTED: caprin-1 isoform 2 P. troglodytes 100.0 627
XP_858109.1 PREDICTED: caprin-1 isoform 2 C. lupus familiaris 99.7 716
NP_001104759.1 Caprin1 gene product M. musculus 98.4 706
NP_001080173.1 cell cycle associated protein 1 X. laevis 80.6 679
NP_998233.1 caprin1b gene product D. rerio 65.5 694
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
XP_002709088.1 PREDICTED: membrane component chromosome 11 surface marker 1 isoform 2 O. cuniculus 99.3 708
XP_003122930.2 PREDICTED: caprin-1 isoform 1 S. scrofa 99.0 708

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; embryonic tissue; lung; mixed; uterus; uncharacterized tissue; skin; intestine; eye; placenta; mammary gland; kidney; trachea; lymph node; prostate; liver; mouth; thymus; pharynx; pancreas; connective tissue; cervix; vascular; blood; bone; ovary; lymph; bone marrow; thyroid; bladder; heart; muscle; stomach; spleen; larynx; parathyroid; salivary gland; adrenal gland; adipose tissue; esophagus; pituitary gland; ear; ascites; nerve; ganglia; tonsil; umbilical cord; epididymis; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 11
Map position: 11p13
UniSTS entry: Chr 11 RH12452
UniSTS entry: Chr 11 SHGC-58520
UniSTS entry: Chr 11 RH64874
UniSTS entry: RH79878
UniSTS entry: RH142945
UniSTS entry: Chr 11 STS-T10644
UniSTS entry: Chr 11 RH123632
UniSTS entry: Chr 11 WI-19568 [Map Viewer]
UniSTS entry: Chr 11 RH93956
UniSTS entry: Chr 11 RH27392
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AK127972.1 Homo sapiens cDNA FLJ46087 fis, clone TESTI2009497, highly similar to GPI-anchored protein p137 P
NM_005898.4 Homo sapiens cell cycle associated protein 1 (CAPRIN1), transcript variant 1, mRNA P
NM_203364.2 Homo sapiens cell cycle associated protein 1 (CAPRIN1), transcript variant 2, mRNA P
BC001731.1 Homo sapiens cell cycle associated protein 1, mRNA (cDNA clone MGC:1378 IMAGE:3355481), complete cds PA
AK074309.1 Homo sapiens cDNA FLJ23729 fis, clone HEP14490 A
AK299720.1 Homo sapiens cDNA FLJ57278 complete cds P
Z48042.1 H.sapiens mRNA encoding GPI-anchored protein p137 P
BC026302.1 Homo sapiens cell cycle associated protein 1, mRNA (cDNA clone IMAGE:4280890) A
BC015700.1 Homo sapiens cell cycle associated protein 1, mRNA (cDNA clone IMAGE:3907023) PA
AF086078.1 Homo sapiens full length insert cDNA clone YZ82F08 A
U51714.1 Human GPI protein p137 mRNA, partial sequence, 3'-UTR

EST sequences (10 of 1686) [Show all sequences]

AA865537.1 Clone IMAGE:1459326 kidney 3' read A
AA864801.1 Clone IMAGE:1456657 kidney 3' read
AA972516.1 Clone IMAGE:1575757 intestine 3' read
AA969925.1 Clone IMAGE:1581157 mixed 3' read
AA972093.1 Clone IMAGE:1582799 mixed 3' read A
AA972743.1 Clone IMAGE:1584159 mixed 3' read P
AA973057.1 Clone IMAGE:1578478 mixed 3' read A
AA974424.1 Clone IMAGE:1587468 uncharacterized tissue 3' read A
AA989264.1 Clone IMAGE:1604018 lung 3' read P
AA993465.1 Clone IMAGE:1618609 testis 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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