> NOP58 ribonucleoprotein (NOP58)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:686263     UniGene Hs.471104     Homo sapiens (human)   NOP58 Order cDNA clone, Links
NOP58 ribonucleoprotein (NOP58)

Human protein-coding gene NOP58. Represented by 384 ESTs from 204 cDNA libraries. Corresponds to reference sequence NM_015934.3. [UniGene 686263 - Hs.471104]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001101291.1 PREDICTED: nucleolar protein 58-like M. mulatta 100.0 529
XP_516036.2 PREDICTED: nucleolar protein 58 isoform 4 P. troglodytes 100.0 528
NP_057018.1 NOP58 gene product H. sapiens 100.0 528
XP_003907873.1 PREDICTED: nucleolar protein 58-like P. anubis 100.0 422
XP_003640236.1 PREDICTED: nucleolar protein 58-like C. lupus familiaris 99.6 531
NP_061356.2 Nop58 gene product M. musculus 98.5 535
NP_001009889.1 nop58 gene product D. rerio 84.4 527
NP_001086628.1 NOP58 ribonucleoprotein homolog X. laevis 84.0 532
NP_477412.1 nop5 D. melanogaster 70.1 510
XP_001690352.1 nucleolar protein, component of C/D snoRNPs C. reinhardtii 67.1 507
NP_187157.1 putative nucleolar protein 5-2 A. thaliana 65.8 531
NP_491134.1 Protein NOL-5 C. elegans 63.5 486
NP_014955.1 Nop58p S. cerevisiae 60.2 507
XP_956843.1 nucleolar protein NOP58 N. crassa 60.2 530
Other hits (2 of 59) [Show all]SpeciesId(%)Len(aa)
XP_001497296.2 PREDICTED: nucleolar protein 58 E. caballus 99.2 518
XP_002712586.1 PREDICTED: NOP58 ribonucleoprotein homolog O. cuniculus 99.1 532

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; skin; uncharacterized tissue; vascular; stomach; mouth; uterus; lymph; lung; muscle; placenta; kidney; mammary gland; blood; eye; intestine; bone; bone marrow; liver; prostate; ovary; mixed; ganglia; amniotic fluid; thymus; tonsil; pancreas; esophagus; testis; heart; connective tissue; pituitary gland; lymph node; pharynx; cervix; ear; ascites; thyroid; adrenal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q33.1
UniSTS entry: RH76425
UniSTS entry: RH102461
UniSTS entry: Chr 2 SHGC-56589
UniSTS entry: Chr 8 D8S1364E
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

NM_015934.3 Homo sapiens NOP58 ribonucleoprotein (NOP58), mRNA PA
AF123534.1 Homo sapiens nucleolar protein NOP5/NOP58 mRNA, complete cds P
AF263608.1 Homo sapiens nucleolar protein 5 (NOP5) mRNA, complete cds P
AK023975.1 Homo sapiens cDNA FLJ13913 fis, clone Y79AA1000231, highly similar to Nucleolar protein NOP5 P
BC001707.1 Homo sapiens, Similar to nucleolar protein NOP5/NOP58, clone IMAGE:3542130, mRNA PA
AK307396.1 Homo sapiens cDNA, FLJ97344 P
BC032592.2 Homo sapiens NOP58 ribonucleoprotein homolog (yeast), mRNA (cDNA clone MGC:45092 IMAGE:5527148), complete cds PA
AK300844.1 Homo sapiens cDNA FLJ56668 complete cds, highly similar to Nucleolar protein NOP5 P
BC018805.1 Homo sapiens NOP58 ribonucleoprotein homolog (yeast), mRNA (cDNA clone IMAGE:4905882) PA
BC009306.2 Homo sapiens NOP58 ribonucleoprotein homolog (yeast), mRNA (cDNA clone IMAGE:4301008), partial cds PA
AF161469.1 Homo sapiens HSPC120 mRNA, complete cds P
AL117554.1 Homo sapiens mRNA; cDNA DKFZp564H2171 (from clone DKFZp564H2171) P

EST sequences (10 of 384) [Show all sequences]

AI051435.1 Clone IMAGE:1659037 embryonic tissue 3' read A
AI053754.1 Clone IMAGE:1862154 ovary 3' read A
AI054059.1 Clone IMAGE:1861459 ovary 3' read A
AI054075.1 Clone IMAGE:1861901 ovary 3' read A
AI054161.1 Clone IMAGE:1861295 ovary 3' read A
CB053417.1 Clone IMAGE:3290861 uncharacterized tissue 5' read
AI206183.1 Clone IMAGE:1941608 uncharacterized tissue 3' read
AI267617.1 Clone IMAGE:2038356 brain
CB158542.1 Clone L18POOL1n1-11-E03 liver 5' read P
CB159666.1 Clone L18POOL1n1-25-E06 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help