> ADP-ribosylation factor-like 5A (ARL5A)
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UGID:685392     UniGene Hs.470233     Homo sapiens (human)   ARL5A Order cDNA clone, Links
ADP-ribosylation factor-like 5A (ARL5A)

Human protein-coding gene ARL5A. Represented by 317 ESTs from 163 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 685392 - Hs.470233]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_446431.1 Arl5a gene product R. norvegicus 100.0 178
XP_001368928.1 PREDICTED: ADP-ribosylation factor-like protein 5A-like M. domestica 100.0 178
XP_003907527.1 PREDICTED: ADP-ribosylation factor-like protein 5A P. anubis 100.0 178
XP_001136344.2 PREDICTED: ADP-ribosylation factor-like 5A P. troglodytes 100.0 178
NP_036229.1 ARL5A gene product H. sapiens 100.0 178
XP_001488644.1 PREDICTED: ADP-ribosylation factor-like protein 5A-like E. caballus 100.0 178
NP_001039710.1 ARL5A gene product B. taurus 100.0 178
NP_001156027.1 ARL5A gene product O. aries 100.0 178
XP_002712212.1 PREDICTED: ADP-ribosylation factor-like 5A O. cuniculus 100.0 178
XP_003432531.1 PREDICTED: ADP-ribosylation factor-like 5A C. lupus familiaris 100.0 141
XP_003362080.1 PREDICTED: ADP-ribosylation factor-like protein 5A-like S. scrofa 100.0 141
NP_892039.1 Arl5a gene product M. musculus 99.4 178
NP_001084932.1 ADP-ribosylation factor-like 5C X. laevis 96.1 178
NP_001002339.1 arl5a gene product D. rerio 95.5 178
NP_648201.1 CG7197 D. melanogaster 76.8 177
NP_188935.1 ADP-ribosylation factor C1 A. thaliana 61.0 177
NP_499178.1 Protein ARL-5 C. elegans 56.7 177
XP_001700009.1 small ARF-related GTPase C. reinhardtii 53.9 178
NP_010089.1 Arf1p S. cerevisiae 53.4 178
XP_965243.1 ADP-ribosylation factor 1 N. crassa 51.5 167
Other hits (2 of 57) [Show all]SpeciesId(%)Len(aa)
XP_002198771.1 PREDICTED: ADP-ribosylation factor-like protein 5A T. guttata 98.9 178
XP_003225426.1 PREDICTED: ADP-ribosylation factor-like protein 5A-like A. carolinensis 98.3 178

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; kidney; uncharacterized tissue; mixed; embryonic tissue; placenta; lung; eye; prostate; vascular; mammary gland; adrenal gland; thyroid; mouth; pituitary gland; bone marrow; skin; heart; testis; liver; pancreas; muscle; spleen; uterus; lymph node; intestine; bladder; blood; epididymis; thymus; pharynx; lymph; salivary gland; stomach; cervix; ascites; nerve; ovary; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2q23.3
UniSTS entry: Chr 2 RH102125
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (9)

NM_177985.2 Homo sapiens ADP-ribosylation factor-like 5A (ARL5A), transcript variant 2, mRNA P
BT009829.1 Homo sapiens ADP-ribosylation factor-like 5 mRNA, complete cds P
NM_012097.3 Homo sapiens ADP-ribosylation factor-like 5A (ARL5A), transcript variant 1, mRNA P
AF100740.1 Homo sapiens ARF-family of Ras related GTPases mRNA, complete cds PA
NM_001037174.1 Homo sapiens ADP-ribosylation factor-like 5A (ARL5A), transcript variant 3, mRNA P
BC001254.1 Homo sapiens ADP-ribosylation factor-like 5A, mRNA (cDNA clone MGC:4986 IMAGE:3453177), complete cds PA
AK292714.1 Homo sapiens cDNA FLJ76463 complete cds, highly similar to Homo sapiens ADP-ribosylation factor-like 5 (ARL5), transcript variant 1, mRNA P
AF493891.1 Homo sapiens ADP-ribosylation factor-like protein 5 (ARF5) mRNA, complete cds P
AK298937.1 Homo sapiens cDNA FLJ51680 complete cds, highly similar to ADP-ribosylation factor-like protein 5A P

EST sequences (10 of 317) [Show all sequences]

AA987360.1 Clone IMAGE:1603348 lung 3' read
AI016011.1 Clone IMAGE:1635603 kidney 3' read A
AI143088.1 Clone IMAGE:1705599 heart 3' read P
CB046772.1 Clone IMAGE:3253037 kidney 3' read A
CB046773.1 Clone IMAGE:3253037 kidney 5' read
CB069758.1 Clone IMAGE:6553606 pancreas 3' read
CB070267.1 Clone IMAGE:6553606 pancreas 5' read P
BX098781.1 Clone IMAGp998I19231_;_IMAGE:150234 placenta A
AI216437.1 Clone IMAGE:1843910 mixed 3' read PA
AI219649.1 Clone IMAGE:1841170 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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