> Synaptotagmin-like 1 (SYTL1)
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UGID:684334     UniGene Hs.469175     Homo sapiens (human)   SYTL1 Order cDNA clone, Links
Synaptotagmin-like 1 (SYTL1)

Human protein-coding gene SYTL1. Represented by 441 ESTs from 135 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 684334 - Hs.469175]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001180237.1 SYTL1 gene product H. sapiens 100.0 561
NP_113570.2 Sytl1 gene product M. musculus 89.2 567
NP_001086662.1 synaptotagmin-like 1 X. laevis 56.0 511
XP_694069.4 PREDICTED: hypothetical LOC565707 D. rerio 53.5 355
Other hits (2 of 23) [Show all]SpeciesId(%)Len(aa)
XP_513243.2 PREDICTED: synaptotagmin-like 1 isoform 2 P. troglodytes 99.3 561
XP_002802304.1 PREDICTED: synaptotagmin-like 1 M. mulatta 97.8 589

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: thymus; uncharacterized tissue; prostate; brain; spleen; mammary gland; mouth; ovary; trachea; blood; pancreas; lung; muscle; liver; lymph node; bone marrow; mixed; intestine; connective tissue; esophagus; uterus; bladder; skin; eye; ascites; embryonic tissue; kidney; placenta; stomach; tonsil; salivary gland; cervix; heart; thyroid; testis; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p36.11
UniSTS entry: Chr 1 SHGC-74508 [Map Viewer]
UniSTS entry: Chr 1 D8S2278
UniSTS entry: Chr 1 D8S2279
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

AK126120.1 Homo sapiens cDNA FLJ44132 fis, clone THYMU2008282 P
AK027902.1 Homo sapiens cDNA FLJ14996 fis, clone Y79AA1002246, weakly similar to SYNAPTOTAGMIN V P
NM_032872.2 Homo sapiens synaptotagmin-like 1 (SYTL1), transcript variant 2, mRNA P
BC009224.2 Homo sapiens synaptotagmin-like 1, mRNA (cDNA clone IMAGE:3942111), partial cds PA
BC015764.1 Homo sapiens synaptotagmin-like 1, mRNA (cDNA clone MGC:23187 IMAGE:4851468), complete cds PA
AK293038.1 Homo sapiens cDNA FLJ75170 complete cds, highly similar to Homo sapiens synaptotagmin-like 1, mRNA PA
AK074154.1 Homo sapiens mRNA for FLJ00227 protein P
AK097172.1 Homo sapiens cDNA FLJ39853 fis, clone SPLEN2014911 P
AK096437.1 Homo sapiens cDNA FLJ39118 fis, clone NTONG2006484, highly similar to Mus musculus slp1 mRNA for synaptotagmin-like protein 1 P
AY037157.1 Homo sapiens hypothetical protein SB146 mRNA, complete cds PA
BC035725.1 Homo sapiens synaptotagmin-like 1, mRNA (cDNA clone MGC:45995 IMAGE:5722683), complete cds PA
NM_001193308.1 Homo sapiens synaptotagmin-like 1 (SYTL1), transcript variant 1, mRNA P

EST sequences (10 of 441) [Show all sequences]

AA864405.1 Clone IMAGE:1459902 kidney 3' read A
AI018296.1 Clone IMAGE:1626826 mixed 3' read A
AI025000.1 Clone IMAGE:1631701 mammary gland 3' read PA
AI079913.1 Clone IMAGE:1659894 embryonic tissue 3' read PA
BX098704.1 Clone IMAGp998I18252_;_IMAGE:158297 mammary gland P
AI341537.1 Clone IMAGE:1939034 embryonic tissue 3' read PA
AI343959.1 Clone IMAGE:2062572 intestine 3' read PA
AI418784.1 Clone IMAGE:2110561 prostate 3' read PA
AI438969.1 Clone IMAGE:2073330 uncharacterized tissue 3' read PA
AI453713.1 Clone IMAGE:2143877 pancreas 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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