> WD and tetratricopeptide repeats 1 (WDTC1)
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UGID:684313     UniGene Hs.469154     Homo sapiens (human)   WDTC1 Order cDNA clone, Links
WD and tetratricopeptide repeats 1 (WDTC1)

Human protein-coding gene WDTC1. Represented by 423 ESTs from 191 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 684313 - Hs.469154]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001129436.1 WDTC1 gene product S. scrofa 100.0 677
XP_001110795.1 PREDICTED: WD and tetratricopeptide repeats protein 1-like M. mulatta 100.0 675
XP_001148073.2 PREDICTED: WD and tetratricopeptide repeats protein 1 isoform 2 P. troglodytes 100.0 675
NP_055838.2 WDTC1 gene product H. sapiens 100.0 675
XP_001504090.1 PREDICTED: WD and tetratricopeptide repeats protein 1 E. caballus 99.8 678
XP_544473.3 PREDICTED: WD and tetratricopeptide repeats protein 1 C. lupus familiaris 99.8 677
XP_002716140.1 PREDICTED: WD and tetratricopeptide repeats 1 O. cuniculus 99.8 674
XP_003891459.1 PREDICTED: WD and tetratricopeptide repeats protein 1 P. anubis 99.8 636
XP_004005133.1 PREDICTED: WD and tetratricopeptide repeats protein 1 O. aries 99.7 662
NP_955010.1 Wdtc1 gene product M. musculus 98.4 676
NP_001124078.1 wdtc1 gene product D. rerio 87.9 669
NP_001083459.1 uncharacterized protein LOC398938 X. laevis 83.8 667
Other hits (2 of 26) [Show all]SpeciesId(%)Len(aa)
XP_001363872.1 PREDICTED: WD and tetratricopeptide repeats protein 1 M. domestica 99.0 669
NP_001101378.1 WD and tetratricopeptide repeats protein 1 R. norvegicus 98.8 675

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; thyroid; connective tissue; lymph; larynx; prostate; heart; pituitary gland; eye; blood; liver; adipose tissue; trachea; lung; mixed; ganglia; muscle; umbilical cord; mammary gland; uncharacterized tissue; intestine; ovary; mouth; uterus; thymus; placenta; lymph node; vascular; embryonic tissue; skin; pancreas; kidney; stomach; ascites; bone; cervix; salivary gland; nerve; spleen
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p36.11
UniSTS entry: Chr 1 SHGC-74467 [Map Viewer]
UniSTS entry: Chr 1 RH69371 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

AK001734.1 Homo sapiens cDNA FLJ10872 fis, clone NT2RP4001725, weakly similar to GUANINE NUCLEOTIDE-BINDING PROTEIN BETA SUBUNIT P
AK023101.1 Homo sapiens cDNA FLJ13039 fis, clone NT2RP3001274, highly similar to Homo sapiens mRNA for KIAA1037 protein P
AK023778.1 Homo sapiens cDNA FLJ13716 fis, clone PLACE2000411, highly similar to Homo sapiens epsin 2b mRNA P
NM_015023.4 Homo sapiens WD and tetratricopeptide repeats 1 (WDTC1), transcript variant 2, mRNA P
AK315564.1 Homo sapiens cDNA, FLJ96636 P
BC032523.1 Homo sapiens WD and tetratricopeptide repeats 1, mRNA (cDNA clone MGC:44910 IMAGE:5500384), complete cds PA
NM_001276252.1 Homo sapiens WD and tetratricopeptide repeats 1 (WDTC1), transcript variant 1, mRNA

EST sequences (10 of 423) [Show all sequences]

R21362.1 Clone IMAGE:35975 brain 5' read
AI090491.1 Clone IMAGE:1692078 heart 3' read A
AI126282.1 Clone IMAGE:1735533 testis 3' read A
AI129150.1 Clone IMAGE:1663271 skin 3' read A
AI142344.1 Clone IMAGE:1839894 testis 5' read
AI147020.1 Clone IMAGE:1693225 heart 3' read A
AI209009.1 Clone IMAGE:1838023 testis 3' read A
AI200837.1 Clone IMAGE:1755130 testis 3' read A
AI224521.1 Clone IMAGE:1858423 mixed 3' read
AI341274.1 Clone IMAGE:2009273 uncharacterized tissue 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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