> Potassium voltage-gated channel, Shaw-related subfamily, member 3 (KCNC3)
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UGID:682305     UniGene Hs.467146     Homo sapiens (human)   KCNC3 Links
Potassium voltage-gated channel, Shaw-related subfamily, member 3 (KCNC3)

Human protein-coding gene KCNC3. Represented by 30 ESTs from 22 cDNA libraries. EST representation biased toward embryoid body. Corresponds to reference sequence NM_004977.2. [UniGene 682305 - Hs.467146]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_004968.2 KCNC3 gene product H. sapiens 100.0 756
XP_003915999.1 PREDICTED: potassium voltage-gated channel subfamily C member 3 P. anubis 99.9 756
NP_032448.2 Kcnc3 gene product M. musculus 96.2 765
NP_001079081.1 potassium voltage-gated channel, Shaw-related subfamily, member 1 X. laevis 78.4 546
NP_001122197.1 kcnc1a gene product D. rerio 72.4 577
NP_476721.1 shaker cognate w, isoform A D. melanogaster 51.1 466
NP_506248.2 Protein SHW-3 C. elegans 51.0 253
Other hits (2 of 39) [Show all]SpeciesId(%)Len(aa)
XP_003356053.1 PREDICTED: potassium voltage-gated channel subfamily C member 3 isoform 1 S. scrofa 98.0 761
NP_001076127.1 KCNC3 gene product O. cuniculus 97.9 758

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: embryoid body [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; uncharacterized tissue; kidney; mixed; uterus; intestine; testis; parathyroid; thyroid; placenta; larynx; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 19
Map position: 19q13.33
UniSTS entry: Chr 1 RH27338
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

AK127492.1 Homo sapiens cDNA FLJ45584 fis, clone BRTHA3013860
NM_004977.2 Homo sapiens potassium voltage-gated channel, Shaw-related subfamily, member 3 (KCNC3), mRNA P
AB208930.1 Homo sapiens mRNA for Shaw-related voltage-gated potassium channel protein 3 variant protein P
AF055989.1 Homo sapiens Shaw type potassium channel Kv3.3 (KCNC3) mRNA, complete cds P

EST sequences (10 of 30) [Show all sequences]

R15924.1 Clone IMAGE:53333 brain 3' read A
R19827.1 Clone IMAGE:33822 brain 5' read
CB152030.1 Clone B1T694954-17-D11 brain 5' read
AI346263.1 Clone IMAGE:1926386 intestine 3' read
AI365599.1 Clone IMAGE:1953654 brain 3' read
AI796491.1 Clone IMAGE:2383756 kidney 3' read A
CD244420.1 Clone IMAGE:30377978 testis 5' read
AW173117.1 Clone IMAGE:2663838 mixed 3' read A
AW297613.1 Clone IMAGE:2731866 uncharacterized tissue 3' read
AW797930.1 uterus


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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