INO80 complex subunit C (INO80C)

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UGID:680062 UniGene Hs.464903 Homo sapiens (human) INO80C

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INO80 complex subunit C (INO80C)

Human protein-coding gene INO80C. Represented by 107 ESTs from 63 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 680062 - Hs.464903]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_001135636.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: INO80 complex subunit C isoform 6	P. troglodytes	100.0	227
NP_001092287.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	INO80C gene product	H. sapiens	100.0	227
NP_766213.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Ino80c gene product	M. musculus	94.8	190
NP_001002108.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	ino80c gene product	D. rerio	72.9	209
Other hits (2 of 19) [Show all]		Species	Id(%)	Len(aa)
XP_002800959.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: INO80 complex subunit C-like isoform 2	M. mulatta	99.1	227
XP_003914353.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: INO80 complex subunit C isoform 1	P. anubis	99.1	227

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	testis; esophagus; thymus; connective tissue; muscle; ascites; prostate; brain; placenta; adrenal gland; mixed; eye; kidney; embryonic tissue; uterus; lung; stomach; bone marrow; uncharacterized tissue; liver; lymph node; skin; bone; pancreas; spleen; ovary

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

Chromosome:	18
Map position:	18q12.2
UniSTS entry:	Chr 18	MARC_13470-13471:1002300368:2

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (4)

NM_194281.3	Homo sapiens INO80 complex subunit C (INO80C), transcript variant 2, mRNA	PA
NM_001098817.1	Homo sapiens INO80 complex subunit C (INO80C), transcript variant 1, mRNA	PA
AK300660.1	Homo sapiens cDNA FLJ58388 complete cds	P
BC039404.1	Homo sapiens INO80 complex subunit C, mRNA (cDNA clone MGC:44599 IMAGE:5300795), complete cds	PA

EST sequences (10 of 107) [Show all sequences]

CB050151.1	Clone IMAGE:3271740	prostate	3' read	PA
CB050152.1	Clone IMAGE:3271740	prostate	5' read	P
BX104897.1	Clone IMAGp998I195403_;_IMAGE:2186586	stomach		A
CB128122.1	Clone L11SNU354-13-B10	liver	5' read	P
AI299207.1	Clone IMAGE:1897172	lung	3' read	A
AI537315.1	Clone IMAGE:2186586	stomach	3' read	A
AI400767.1	Clone IMAGE:2115907	mixed	3' read	A
AI685405.1	Clone IMAGE:2248590	prostate	3' read	A
AI702835.1	Clone IMAGE:2340469	lung	3' read
AI758919.1	Clone IMAGE:2285711	kidney	3' read	PA

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria