> ATPase, H+ transporting, lysosomal V0 subunit a1 (ATP6V0A1)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:678233     UniGene Hs.463074     Homo sapiens (human)   ATP6V0A1 Order cDNA clone, Links
ATPase, H+ transporting, lysosomal V0 subunit a1 (ATP6V0A1)

Human protein-coding gene ATP6V0A1. Represented by 1334 ESTs from 295 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 678233 - Hs.463074]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003913126.1 PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1 isoform 3 P. anubis 100.0 837
XP_511508.2 PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1 isoform 12 P. troglodytes 100.0 837
NP_001123492.1 ATP6V0A1 gene product H. sapiens 100.0 837
XP_001095161.2 PREDICTED: v-type proton ATPase 116 kDa subunit a isoform 1 M. mulatta 99.6 802
NP_001229980.1 Atp6v0a1 gene product M. musculus 98.2 838
NP_001080294.1 V-type proton ATPase 116 kDa subunit a isoform 1 X. laevis 93.4 830
NP_001018502.1 atp6v0a1b gene product D. rerio 90.6 838
NP_733271.1 vacuolar H[+] ATPase subunit 100-1, isoform A D. melanogaster 72.0 825
NP_001023022.1 Protein UNC-32, isoform f C. elegans 68.8 877
NP_014913.3 Vph1p S. cerevisiae 53.7 588
XP_001692167.1 vacuolar proton ATPase subunit A C. reinhardtii 51.5 627
XP_956054.1 hypothetical protein NCU03463 N. crassa 50.2 601
NP_568051.1 V-type H+-transporting ATPase subunit I A. thaliana 49.9 570
Other hits (2 of 57) [Show all]SpeciesId(%)Len(aa)
XP_001494274.2 PREDICTED: v-type proton ATPase 116 kDa subunit a isoform 1 isoform 1 E. caballus 99.2 838
XP_859219.1 PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1 isoform 14 C. lupus familiaris 99.0 838

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; uncharacterized tissue; kidney; uterus; placenta; spinal cord; thymus; intestine; vascular; ganglia; ovary; eye; mouth; lung; pancreas; connective tissue; embryonic tissue; mammary gland; nerve; blood; spleen; heart; trachea; mixed; prostate; adipose tissue; skin; liver; muscle; lymph node; pharynx; adrenal gland; pituitary gland; stomach; umbilical cord; larynx; thyroid; ascites; lymph; bone; ear
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q21
UniSTS entry: MARC_17693-17694:1031748036:1
UniSTS entry: Chr 1 RH80030
UniSTS entry: Chr 1 D11S3114
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (20)

AL096733.1 Homo sapiens mRNA; cDNA DKFZp434E071 (from clone DKFZp434E071) A
BX648978.1 Homo sapiens mRNA; cDNA DKFZp686N0561 (from clone DKFZp686N0561) P
AK125927.1 Homo sapiens cDNA FLJ43939 fis, clone TESTI4014159
NM_005177.3 Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a1 (ATP6V0A1), transcript variant 3, mRNA PA
AL137683.1 Homo sapiens mRNA; cDNA DKFZp434H202 (from clone DKFZp434H202); partial cds PA
CR627443.1 Homo sapiens mRNA; cDNA DKFZp781J1951 (from clone DKFZp781J1951) PA
AK223554.1 Homo sapiens mRNA for ATPase, H+ transporting, lysosomal V0 subunit a isoform 1 variant, clone: FCC126F11 P
AB074282.1 Homo sapiens primary neuroblastoma cDNA, clone:Nbla11201, full insert sequence
L78933.1 Homo sapiens vacuolar-type H(+)-ATPase mRNA, complete cds P
BC032398.1 Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a1, mRNA (cDNA clone MGC:40328 IMAGE:5195776), complete cds PA
AK098213.1 Homo sapiens cDNA FLJ40894 fis, clone UTERU2002001
NM_001130021.1 Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a1 (ATP6V0A1), transcript variant 2, mRNA PA
NM_001130020.1 Homo sapiens ATPase, H+ transporting, lysosomal V0 subunit a1 (ATP6V0A1), transcript variant 1, mRNA PA
AK316305.1 Homo sapiens cDNA, FLJ79204 complete cds, highly similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1 P
AK299784.1 Homo sapiens cDNA FLJ54439 complete cds, highly similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1 P
AK295682.1 Homo sapiens cDNA FLJ54433 complete cds, highly similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1 P
AK294789.1 Homo sapiens cDNA FLJ53786 complete cds, highly similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1 P
AK294512.1 Homo sapiens cDNA FLJ53780 complete cds, highly similar to Vacuolar proton translocating ATPase 116 kDa subunit a isoform 1 P
Z71460.1 Homo sapiens mRNA for vacuolar-type H(+)-ATPase 115 kDa subunit P
U18920.1 Human chromosome 17q12-21 mRNA, clone pOV-3, partial cds

EST sequences (10 of 1334) [Show all sequences]

AA974587.1 Clone IMAGE:1578203 mixed 3' read A
R14985.1 Clone IMAGE:35609 brain 5' read
R17329.1 Clone IMAGE:32190 brain 5' read
AI023345.1 Clone IMAGE:1655337 mixed 3' read
AI125231.1 Clone IMAGE:1736485 testis 3' read A
AI161297.1 Clone IMAGE:1703897 brain 3' read A
BX118141.1 Clone IMAGp998A20161_;_IMAGE:35609 brain A
AI168747.1 Clone IMAGE:1661312 mixed 3' read A
AI192706.1 Clone IMAGE:1744027 lung 3' read A
AI241757.1 Clone IMAGE:1977547 brain 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help