> Schlafen family member 13 (SLFN13)
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UGID:677992     UniGene Hs.462833     Homo sapiens (human)   SLFN13 Order cDNA clone, Links
Schlafen family member 13 (SLFN13)

Human protein-coding gene SLFN13. Represented by 86 ESTs from 41 cDNA libraries. Corresponds to reference sequence NM_144682.5. [UniGene 677992 - Hs.462833]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_653283.3 SLFN13 gene product H. sapiens 100.0 896
NP_766384.2 schlafen 9 M. musculus 69.4 893
NP_001084741.1 uncharacterized protein LOC414711 X. laevis 51.1 180
Other hits (2 of 12) [Show all]SpeciesId(%)Len(aa)
XP_001174230.2 PREDICTED: schlafen family member 13 isoform 8 P. troglodytes 99.4 897
XP_001114211.1 PREDICTED: schlafen family member 13-like isoform 3 M. mulatta 91.9 896

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; mammary gland; intestine; spleen; thyroid; trachea; lung; stomach; vascular; placenta; mouth; brain; mixed; thymus; embryonic tissue; uterus; connective tissue; lymph node; muscle; kidney; blood; uncharacterized tissue; ganglia; heart; cervix
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q12
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

AK127728.1 Homo sapiens cDNA FLJ45828 fis, clone NT2RP8005546 P
AK126184.1 Homo sapiens cDNA FLJ44196 fis, clone THYMU3000133, highly similar to Homo sapiens likley ortholog of mouse schlafen 10, mRNA P
AK122750.1 Homo sapiens cDNA FLJ16277 fis, clone NT2RI3000423, highly similar to Homo sapiens likley ortholog of mouse schlafen 10, mRNA P
CR749630.1 Homo sapiens mRNA; cDNA DKFZp686I026 (from clone DKFZp686I026) PA
AK056514.1 Homo sapiens cDNA FLJ31952 fis, clone NT2RP7007221, weakly similar to Rattus norvegicus schlafen-4 (SLFN-4) mRNA PA
AK074465.1 Homo sapiens cDNA FLJ23885 fis, clone LNG13907 A
NM_144682.5 Homo sapiens schlafen family member 13 (SLFN13), mRNA PA
AL833747.1 Homo sapiens mRNA; cDNA DKFZp666J196 (from clone DKFZp666J196) PA
AL832726.1 Homo sapiens mRNA; cDNA DKFZp313N099 (from clone DKFZp313N099) PA
BC171771.1 Homo sapiens schlafen family member 13, mRNA (cDNA clone MGC:198486 IMAGE:9054425), complete cds P
BC136622.1 Homo sapiens schlafen family member 13, mRNA (cDNA clone MGC:168235 IMAGE:9020612), complete cds P

EST sequences (10 of 86) [Show all sequences]

AA969331.1 Clone IMAGE:1580495 mixed 3' read
AI205296.1 Clone IMAGE:1952930 brain 3' read
AI478308.1 Clone IMAGE:2160522 kidney 3' read
AI609173.1 Clone IMAGE:2267293 mouth 3' read
CB242377.1 Clone UI-CF-FN0-age-o-20-0-UI lung 3' read A
CB242690.1 Clone UI-CF-FN0-afs-b-10-0-UI lung 3' read A
CB986231.1 Clone IMAGE:30328651 mixed 5' read
CB851467.1 Clone UI-CF-DU1-adt-l-20-0-UI lung 3' read A
CB852205.1 Clone UI-CF-FN0-aer-k-04-0-UI lung 3' read
BX476862.1 Clone DKFZp686L05189 muscle 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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