> Nuclear speckle splicing regulatory protein 1 (NSRP1)
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UGID:677822     UniGene Hs.462663     Homo sapiens (human)   NSRP1 Order cDNA clone, Links
Nuclear speckle splicing regulatory protein 1 (NSRP1)

Human protein-coding gene NSRP1. Represented by 186 ESTs from 125 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 677822 - Hs.462663]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_115517.1 NSRP1 gene product H. sapiens 100.0 557
XP_511382.2 PREDICTED: nuclear speckle splicing regulatory protein 1 isoform 10 P. troglodytes 99.6 557
NP_001012309.1 Ccdc55 gene product M. musculus 84.3 541
NP_001070898.1 nsrp1 gene product D. rerio 66.1 292
Other hits (2 of 28) [Show all]SpeciesId(%)Len(aa)
XP_001111595.2 PREDICTED: coiled-coil domain-containing protein 55-like isoform 3 M. mulatta 97.6 573
XP_003912608.1 PREDICTED: nuclear speckle splicing regulatory protein 1 P. anubis 97.2 394

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; mixed; vascular; kidney; pharynx; uncharacterized tissue; uterus; mammary gland; nerve; embryonic tissue; intestine; stomach; liver; skin; bone marrow; testis; esophagus; blood; thyroid; ovary; thymus; bone; pancreas; larynx; prostate; spleen; muscle; eye; cervix; heart; lung; bladder; mouth; connective tissue; placenta
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17q11.2
UniSTS entry: Chr 17 STS-T98371
UniSTS entry: Chr 17 RH15872
UniSTS entry: D11S2593
UniSTS entry: D11S2591
UniSTS entry: D11S2920
UniSTS entry: PMC92356P1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

BC046116.2 Homo sapiens coiled-coil domain containing 55, mRNA (cDNA clone IMAGE:3913258) PA
BC062425.1 Homo sapiens coiled-coil domain containing 55, mRNA (cDNA clone IMAGE:6654717) PA
CR533555.1 Homo sapiens full open reading frame cDNA clone RZPDo834E0521D for gene DKFZP434K1421, hypothetical protein DKFZp434K1421; complete cds, incl. stopcodon P
BC105044.1 Homo sapiens coiled-coil domain containing 55, mRNA (cDNA clone MGC:132704 IMAGE:8144047), complete cds P
BC105046.1 Homo sapiens coiled-coil domain containing 55, transcript variant 1, mRNA (cDNA clone MGC:132706 IMAGE:8144049), complete cds P
AL136806.1 Homo sapiens mRNA; cDNA DKFZp434K1421 (from clone DKFZp434K1421) PA
NM_032141.3 Homo sapiens nuclear speckle splicing regulatory protein 1 (NSRP1), transcript variant 1, mRNA PA
AK313963.1 Homo sapiens cDNA, FLJ94609 P
AK094552.1 Homo sapiens cDNA FLJ37233 fis, clone BRAMY2002072 P
BC016313.1 Homo sapiens coiled-coil domain containing 55, mRNA (cDNA clone IMAGE:4099763), partial cds PA
AF161358.1 Homo sapiens HSPC095 mRNA, partial cds P
BC143539.1 Homo sapiens coiled-coil domain containing 55, mRNA (cDNA clone IMAGE:9052050), partial cds P
BC143417.1 Homo sapiens cDNA clone IMAGE:9051925, containing frame-shift errors P
AK297102.1 Homo sapiens cDNA FLJ50801 complete cds, highly similar to Coiled-coil domain-containing protein 55 P
NM_001261467.1 Homo sapiens nuclear speckle splicing regulatory protein 1 (NSRP1), transcript variant 2, mRNA PA
BC040118.1 Homo sapiens coiled-coil domain containing 55, mRNA (cDNA clone MGC:48714 IMAGE:5176197), complete cds PA

EST sequences (10 of 186) [Show all sequences]

AA991639.1 Clone IMAGE:1611993 uncharacterized tissue 3' read P
R16879.1 Clone IMAGE:129683 mixed 3' read A
R16931.1 Clone IMAGE:129683 mixed 5' read
CA975857.1 Clone IMAGE:6202250 nerve 5' read P
AI093954.1 Clone IMAGE:1688521 mixed 3' read A
BX113866.1 Clone IMAGp998B19115_;_IMAGE:122034 mixed A
AI208502.1 Clone IMAGE:1839139 testis 3' read
AI208503.1 Clone IMAGE:1839141 testis 3' read A
CB162055.1 Clone L17N670205n1-16-F10 liver 5' read P
CB163351.1 Clone L17N670205n1-26-H01 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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