> Copine VII (CPNE7)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:676934     UniGene Hs.461775     Homo sapiens (human)   CPNE7 Order cDNA clone, Links
Copine VII (CPNE7)

Human protein-coding gene CPNE7. Represented by 74 ESTs from 44 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 676934 - Hs.461775]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_055242.1 CPNE7 gene product H. sapiens 100.0 632
NP_733785.1 copine-7 M. musculus 92.5 556
XP_692981.4 PREDICTED: copine-7-like D. rerio 83.3 558
NP_001088611.1 copine III X. laevis 59.1 526
NP_568944.1 calcium-dependent phospholipid-binding copine-like protein A. thaliana 52.0 177
NP_872104.1 Protein NRA-1, isoform b C. elegans 51.1 176
Other hits (2 of 41) [Show all]SpeciesId(%)Len(aa)
XP_003917402.1 PREDICTED: LOW QUALITY PROTEIN: copine-7 P. anubis 97.8 639
XP_002694812.1 PREDICTED: copine-7 B. taurus 93.1 548

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; intestine; liver; uterus; eye; blood; ascites; embryonic tissue; prostate; kidney; placenta; lung; mixed; uncharacterized tissue; testis; stomach; connective tissue; mouth; bone
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16q24.3
UniSTS entry: Chr 16 RH12020 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AK123526.1 Homo sapiens cDNA FLJ41532 fis, clone BRTHA2015478 P
BC064577.1 Homo sapiens copine VII, mRNA (cDNA clone MGC:70404 IMAGE:5727324), complete cds PA
AJ133798.1 Homo sapiens mRNA for copine VI protein P
NM_014427.4 Homo sapiens copine VII (CPNE7), transcript variant 2, mRNA PA
BC035334.1 Homo sapiens copine VII, mRNA (cDNA clone MGC:34192 IMAGE:5191900), complete cds PA
NM_153636.2 Homo sapiens copine VII (CPNE7), transcript variant 1, mRNA PA

EST sequences (10 of 74) [Show all sequences]

R19516.1 Clone IMAGE:33499 brain 5' read
BX101546.1 Clone IMAGp998K074638_;_IMAGE:1892862 placenta
AI278055.1 Clone IMAGE:1892862 placenta 3' read A
BX281473.1 Clone IMAGp998A1811623_;_IMAGE:5246873 brain P
AI915130.1 Clone IMAGE:2393690 intestine 3' read A
BX333801.2 Clone CS0DD002YC09 uncharacterized tissue 3' read
BX333802.2 Clone CS0DD002YC09 uncharacterized tissue 5' read P
BX441703.2 Clone CS0DF020YB10 brain 5' read P
BX431644.2 Clone CS0DF033YD15 brain 5' read P
BX444964.2 Clone CS0DF020YB10 brain 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help