NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Query Tips
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
dbEST
Trace Archive

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:675237     UniGene Hs.460078     Homo sapiens (human)   RRN3 Order cDNA clone, Links
RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) (RRN3)
SELECTED PROTEIN SIMILARITIES
Comparison of sequences in UniGene with selected protein reference sequences. The alignments can suggest function of a gene.
Reference ProteinSpeciesId(%)Len(aa)
NP_060897.3 RRN3 RNA polymerase I transcription factor homolog H. sapiens 100.0 650
XP_001143837.1 PREDICTED: RRN3 RNA polymerase I transcription factor homolog, partial P. troglodytes 100.0 570
NP_001034610.1 RRN3 RNA polymerase I transcription factor homolog M. musculus 91.8 655
NP_001107876.1 hypothetical protein LOC443681 X. laevis 77.0 609
XP_706962.1 PREDICTED: similar to RNA polymerase I-specific transcription initiation factor RRN3 (Transcription initiation factor IA) (TIF-IA) isoform 2 D. rerio 69.4 605

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; skin; blood; muscle; mammary gland; eye; bone marrow; intestine; thyroid; liver; mixed; lung; lymph node; placenta; pituitary gland; ear; pancreas; embryonic tissue; uncharacterized tissue; uterus; mouth; connective tissue; ovary; heart; trachea; adrenal gland; bladder; salivary gland; prostate; vascular; bone; thymus; ascites; cervix; kidney; spleen
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p12
UniSTS entry: RH103343
UniSTS entry: Chr 2 D11S2921
UniSTS entry: Chr 2 D10S16
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (18)

AL110238.1 Homo sapiens mRNA; cDNA DKFZp566E104 (from clone DKFZp566E104)
BC071868.1 Homo sapiens RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:6278263), partial cds PA
NM_018427.3 Homo sapiens RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) (RRN3), mRNA PA
AF227156.1 Homo sapiens RRN3 mRNA, complete cds P
AJ272050.1 Homo sapiens mRNA for transcription initiation factor IA protein (TIF-IA gene) PA
BC104660.1 Homo sapiens RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:4612605), complete cds PA
AK225662.1 Homo sapiens mRNA for RRN3 RNA polymerase I transcription factor homolog, clone: STM04189 PA
BC132690.1 Homo sapiens RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae), mRNA (cDNA clone MGC:164321 IMAGE:40146712), complete cds P
BC132688.1 Homo sapiens RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae), mRNA (cDNA clone MGC:164319 IMAGE:40146710), complete cds P
AK314769.1 Homo sapiens cDNA, FLJ95638, Homo sapiens RNA polymerase I transcription factor RRN3 (RRN3),mRNA P
AK092795.1 Homo sapiens cDNA FLJ35476 fis, clone SMINT2007579
AK300253.1 Homo sapiens cDNA FLJ50670 complete cds, highly similar to RNA polymerase I-specific transcription initiation factor RRN3 P
AK304856.1 Homo sapiens cDNA FLJ53965 complete cds, highly similar to RNA polymerase I-specific transcription initiation factor RRN3 P
AK303405.1 Homo sapiens cDNA FLJ52380 complete cds, highly similar to RNA polymerase I-specific transcriptioninitiation factor RRN3 P
AK302994.1 Homo sapiens cDNA FLJ55505 complete cds, highly similar to RNA polymerase I-specific transcription initiation factor RRN3 P
AK295486.1 Homo sapiens cDNA FLJ56083 complete cds, highly similar to RNA polymerase I-specific transcriptioninitiation factor RRN3 P
AK316520.1 Homo sapiens cDNA, FLJ79419 complete cds, highly similar to RNA polymerase I-specific transcription initiation factor RRN3 P
BC036182.1 Homo sapiens RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae), mRNA (cDNA clone IMAGE:5298581) PA

EST sequences (10 of 213) [Show all sequences]

AA987540.1 Clone IMAGE:1605078 lung 3' read
AA910710.1 Clone IMAGE:1521180 lung 3' read A
AA911105.1 Clone IMAGE:1519064 uncharacterized tissue 3' read A
R17814.1 Clone IMAGE:31871 brain 5' read
AI050780.1 Clone IMAGE:1637070 kidney 3' read A
AI217698.1 Clone IMAGE:1844762 mixed 3' read P
CB150625.1 Clone C1SNU17-32-D03 cervix 5' read P
CB148063.1 Clone L9SNU354-17-D09 liver 5' read
AA928080.1 Clone IMAGE:1563546 mixed 3' read A
AI381593.1 Clone IMAGE:2074787 uncharacterized tissue 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help