> Activating transcription factor 3 (ATF3)
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UGID:130767     UniGene Hs.460     Homo sapiens (human)   ATF3 Order cDNA clone, Links
Activating transcription factor 3 (ATF3)

Human protein-coding gene ATF3. Represented by 459 ESTs from 168 cDNA libraries. Corresponds to 6 reference sequences (different isoforms). [UniGene 130767 - Hs.460]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001107925.1 PREDICTED: cyclic AMP-dependent transcription factor ATF-3 isoform 2 M. mulatta 100.0 180
XP_003918837.1 PREDICTED: cyclic AMP-dependent transcription factor ATF-3 isoform 1 P. anubis 100.0 180
XP_524528.3 PREDICTED: cyclic AMP-dependent transcription factor ATF-3 P. troglodytes 100.0 180
NP_001665.1 ATF3 gene product H. sapiens 100.0 180
NP_031524.2 Atf3 gene product M. musculus 97.8 180
NP_001087487.1 activating transcription factor 3 X. laevis 86.7 180
NP_957258.1 atf3 gene product D. rerio 79.2 201
Other hits (2 of 17) [Show all]SpeciesId(%)Len(aa)
XP_001489152.1 PREDICTED: cyclic AMP-dependent transcription factor ATF-3-like E. caballus 99.5 180
XP_003482797.1 PREDICTED: cyclic AMP-dependent transcription factor ATF-3-like isoform 1 S. scrofa 99.5 180

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; lung; brain; mixed; kidney; uncharacterized tissue; prostate; intestine; uterus; liver; blood; thyroid; skin; nerve; pharynx; heart; pancreas; embryonic tissue; bladder; mammary gland; adrenal gland; testis; trachea; connective tissue; spleen; mouth; muscle; parathyroid; cervix; ascites; lymph node; epididymis; ganglia; ovary; stomach; esophagus; eye; vascular; bone; bone marrow; adipose tissue; pituitary gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1q32.3
UniSTS entry: Chr 1 SHGC-76330 [Map Viewer]
UniSTS entry: Atf3
UniSTS entry: Chr 1 SHGC-12563 [Map Viewer]
UniSTS entry: Chr 1 PMC117192P1
UniSTS entry: Chr 1 RH17630 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (17)

BT006996.1 Homo sapiens activating transcription factor 3 mRNA, complete cds P
AY313927.1 Homo sapiens activating transcription factor 3 delta Zip2c (ATF3) mRNA, complete cds, alternatively spliced P
AK125255.1 Homo sapiens cDNA FLJ43265 fis, clone HLUNG2018626, highly similar to Rattus norvegicus Activating transcription factor 3 (Atf3)
NM_001674.3 Homo sapiens activating transcription factor 3 (ATF3), transcript variant 1, mRNA PA
CR450334.1 Homo sapiens full open reading frame cDNA clone RZPDo834A122D for gene ATF3, activating transcription factor 3; complete cds; without stopcodon P
NM_001030287.3 Homo sapiens activating transcription factor 3 (ATF3), transcript variant 3, mRNA PA
NM_001040619.2 Homo sapiens activating transcription factor 3 (ATF3), transcript variant 4, mRNA PA
BC006322.2 Homo sapiens activating transcription factor 3, mRNA (cDNA clone MGC:12746 IMAGE:4138076), complete cds PA
AB066566.1 Homo sapiens ATF3 mRNA for activating transcription factor 3 delta Zip2, complete cds P
AK312998.1 Homo sapiens cDNA, FLJ93461, Homo sapiens activating transcription factor 3 (ATF3), mRNA P
AB078027.1 Homo sapiens ATF3deltaZip2b mRNA for ATF3deltaZip2, complete cds P
AB078026.1 Homo sapiens ATF3deltaZip2a mRNA for ATF3deltaZip2, complete cds P
AB078028.1 Homo sapiens ATF3deltaZip2exonD'DE'E mRNA for ATF3deltaZip2, partial cds
NM_001206488.2 Homo sapiens activating transcription factor 3 (ATF3), transcript variant 8, mRNA PA
NM_001206486.2 Homo sapiens activating transcription factor 3 (ATF3), transcript variant 7, mRNA PA
NM_001206484.2 Homo sapiens activating transcription factor 3 (ATF3), transcript variant 5, mRNA PA
L19871.1 Human activating transcription factor 3 (ATF3) mRNA, complete cds P

EST sequences (10 of 459) [Show all sequences]

AA962624.1 Clone IMAGE:1553653 kidney 3' read A
AA903193.1 Clone IMAGE:1517187 uncharacterized tissue 3' read A
AA972887.1 Clone IMAGE:1577828 mixed 3' read A
AI000585.1 Clone IMAGE:1609994 mammary gland 3' read
AI025054.1 Clone IMAGE:1639402 testis 3' read P
AI056319.1 Clone IMAGE:1668995 brain 3' read A
AI075705.1 Clone IMAGE:1676289 embryonic tissue 3' read A
AI080309.1 Clone IMAGE:1678909 skin 3' read A
AI081317.1 Clone IMAGE:1661899 mixed 3' read A
AI123999.1 Clone IMAGE:1694906 uterus 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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