> Neurofilament, medium polypeptide (NEFM)
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UGID:673816     UniGene Hs.458657     Homo sapiens (human)   NEFM Order cDNA clone, Links
Neurofilament, medium polypeptide (NEFM)

Human protein-coding gene NEFM. Represented by 522 ESTs from 99 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 673816 - Hs.458657]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_005373.2 NEFM gene product H. sapiens 100.0 915
NP_032717.2 Nefm gene product M. musculus 94.3 847
NP_001081681.1 neurofilament, medium polypeptide X. laevis 69.6 911
NP_001104684.1 nefma gene product D. rerio 66.9 840
Other hits (2 of 22) [Show all]SpeciesId(%)Len(aa)
XP_001106972.2 PREDICTED: neurofilament medium polypeptide-like isoform 2 M. mulatta 99.1 881
XP_001150727.2 PREDICTED: LOW QUALITY PROTEIN: neurofilament medium polypeptide P. troglodytes 99.1 864

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; kidney; testis; eye; uncharacterized tissue; ear; muscle; skin; nerve; pancreas; pineal gland; embryonic tissue; mixed; prostate; spinal cord; ganglia
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 8
Map position: 8p21
UniSTS entry: Chr 8 PMC125376P1
UniSTS entry: Chr 8 D8S1927
UniSTS entry: Chr 8 MARC_16085-16086:1013616869:1
UniSTS entry: Chr 10 NEF3_219
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

NM_005382.2 Homo sapiens neurofilament, medium polypeptide (NEFM), transcript variant 1, mRNA PA
BC071752.1 Homo sapiens neurofilament 3 (150kDa medium), mRNA (cDNA clone IMAGE:6464368), partial cds PA
BC096757.1 Homo sapiens neurofilament, medium polypeptide, mRNA (cDNA clone MGC:104856 IMAGE:5442340), complete cds PA
EF560737.1 Homo sapiens clone DKFZp686O1498 NEFM protein (NEFM) mRNA, complete cds PA
EF560736.1 Homo sapiens clone DKFZp686A1298 NEFM protein (NEFM) mRNA, complete cds P
NM_001105541.1 Homo sapiens neurofilament, medium polypeptide (NEFM), transcript variant 2, mRNA PA
AK308605.1 Homo sapiens cDNA, FLJ98646 P
AK294681.1 Homo sapiens cDNA FLJ58361 complete cds, highly similar to Neurofilament triplet M protein P
AK296226.1 Homo sapiens cDNA FLJ56511 complete cds, highly similar to Neurofilament triplet M protein P
AF181990.1 Homo sapiens neurofilament-3 (150 kD medium) (NEF3) mRNA, partial cds P

EST sequences (10 of 522) [Show all sequences]

AA962021.1 Clone IMAGE:1593850 kidney 3' read PA
AA984308.1 Clone IMAGE:1629762 brain 3' read
BX090070.1 Clone IMAGp998M221825_;_IMAGE:743229 testis A
AL048774.2 Clone DKFZp566N163 kidney PA
AI879331.1 Clone IMAGE:2518857 brain 5' read P
BX431039.1 Clone CS0DF015YA09 brain 5' read P
BX431040.2 Clone CS0DF015YA09 brain 5' read P
BX444887.2 Clone CS0DF015YA09 brain 5' read
BX451572.2 Clone CS0DF026YE02 brain 5' read P
BX460486.2 Clone CS0DF015YA09 brain 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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