> Calcium binding protein 1 (CABP1)
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UGID:673641     UniGene Hs.458482     Homo sapiens (human)   CABP1 Order cDNA clone, Links
Calcium binding protein 1 (CABP1)

Human protein-coding gene CABP1. Represented by 66 ESTs from 35 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 673641 - Hs.458482]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001028849.1 CABP1 gene product H. sapiens 100.0 369
XP_003365541.1 PREDICTED: calcium-binding protein 1-like E. caballus 100.0 166
XP_509431.3 PREDICTED: calcium-binding protein 1 isoform 3 P. troglodytes 99.7 312
NP_038907.1 Cabp1 gene product M. musculus 98.7 226
NP_001002414.1 cabp1b gene product D. rerio 91.0 166
Other hits (2 of 18) [Show all]SpeciesId(%)Len(aa)
XP_002719854.1 PREDICTED: calcium binding protein 1 isoform 2 O. cuniculus 99.1 226
NP_776679.1 CABP1 gene product B. taurus 99.1 225

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; eye; pineal gland; intestine; lung; mixed; kidney; placenta; uncharacterized tissue; testis
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12q24.31
UniSTS entry: Chr 12 RH102996
UniSTS entry: Chr 12 D12S183
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

NM_004276.4 Homo sapiens calcium binding protein 1 (CABP1), transcript variant 2, mRNA PA
AF169148.1 Homo sapiens s-CaBP1 (CABP1) mRNA, complete cds P
AF169149.1 Homo sapiens L-CaBP1 (CABP1) mRNA, complete cds P
NM_001033677.1 Homo sapiens calcium binding protein 1 (CABP1), transcript variant 3, mRNA PA
NM_031205.3 Homo sapiens calcium binding protein 1 (CABP1), transcript variant 1, mRNA PA
BC030201.1 Homo sapiens calcium binding protein 1, mRNA (cDNA clone MGC:34675 IMAGE:5200625), complete cds PA

EST sequences (10 of 66) [Show all sequences]

R15354.1 Clone IMAGE:29685 brain 5' read
AI096715.1 Clone IMAGE:1685880 brain 3' read A
CB046141.1 Clone IMAGE:3252613 kidney 3' read A
CB046142.1 Clone IMAGE:3252613 kidney 5' read A
BX280479.1 Clone IMAGp998J1911727_;_IMAGE:5287794 brain
BX281313.1 Clone IMAGp998L0711495_;_IMAGE:5197974 brain P
BX396377.2 Clone CS0DI016YI03 placenta 5' read P
BX463463.2 Clone CS0DN002YD06 brain 5' read P
AW074617.1 Clone IMAGE:2573941 intestine 3' read A
AF149229.1 Clone MPMGp800P17578Q104 brain P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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