> Sorting nexin 29 (SNX29)
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UGID:627364     UniGene Hs.458401     Homo sapiens (human)   SNX29 Links
Sorting nexin 29 (SNX29)

Human protein-coding gene SNX29. Represented by 227 ESTs from 119 cDNA libraries. Corresponds to reference sequence NM_032167.3. [UniGene 627364 - Hs.458401]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_115543.3 SNX29 gene product H. sapiens 100.0 812
NP_083240.2 Snx29 gene product M. musculus 92.3 817
XP_693885.3 PREDICTED: sorting nexin-29-like D. rerio 72.7 822
Other hits (2 of 28) [Show all]SpeciesId(%)Len(aa)
XP_003916611.1 PREDICTED: sorting nexin-29-like P. anubis 99.3 680
XP_001107972.2 PREDICTED: hypothetical protein LOC716922 M. mulatta 98.8 804

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lymph node; eye; uncharacterized tissue; mixed; skin; lymph; mammary gland; testis; mouth; thymus; pancreas; prostate; placenta; kidney; uterus; embryonic tissue; lung; ovary; blood; intestine; pineal gland; vascular; spleen; bladder; liver; tonsil; connective tissue; amniotic fluid; ear; heart; pharynx; larynx; bone marrow; adipose tissue
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 16
Map position: 16p13.13-p13.12
UniSTS entry: Chr 16 G20567
UniSTS entry: Chr 16 A005X12
UniSTS entry: Chr 16 D16S2570E
UniSTS entry: Chr 16 RH66309 [Map Viewer]
UniSTS entry: Chr 16 RH25185
UniSTS entry: Chr 16 SHGC-61125 [Map Viewer]
UniSTS entry: Chr 16 SHGC-60616
UniSTS entry: Chr 16 SHGC-17252
UniSTS entry: D16S2956
UniSTS entry: RH92042
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

BX648908.1 Homo sapiens mRNA; cDNA DKFZp686F05268 (from clone DKFZp686F05268) A
AL137333.1 Homo sapiens mRNA; cDNA DKFZp434O1572 (from clone DKFZp434O1572)
AK024473.1 Homo sapiens mRNA for FLJ00066 protein, partial cds
NM_032167.3 Homo sapiens sorting nexin 29 (SNX29), mRNA P
BC013346.2 Homo sapiens similar to RIKEN cDNA 4933437K13, mRNA (cDNA clone IMAGE:3677155) A
AK074072.1 Homo sapiens mRNA for FLJ00143 protein P
BC029857.1 Homo sapiens sorting nexin 29, mRNA (cDNA clone IMAGE:5177668), partial cds PA

EST sequences (10 of 227) [Show all sequences]

R18391.1 Clone IMAGE:30936 brain 5' read
AI023479.1 Clone IMAGE:1654623 mixed 3' read
T06171.1 Clone HFBDP67 brain
BX105406.1 Clone IMAGp998D154963 brain 5' read
BX113473.1 Clone IMAGp998K1185_;_IMAGE:110722 mixed
BX098856.1 Clone IMAGp998D204418_;_IMAGE:1738723 testis
BX091400.1 Clone IMAGp998O15823_;_IMAGE:358502 heart
AI203453.1 Clone IMAGE:1735004 testis 3' read
AI365018.1 Clone IMAGE:1948385 uncharacterized tissue 3' read
AI369000.1 Clone IMAGE:1991359 uterus 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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