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UGID:627297     UniGene Hs.458334     Homo sapiens (human)   HERC2P2
Hect domain and RLD 2 pseudogene 2 (HERC2P2)

Human pseudo gene HERC2P2. Represented by 333 ESTs from 181 cDNA libraries. Corresponds to reference sequence NR_002824.3. [UniGene 627297 - Hs.458334]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_004658.3 HERC2 gene product H. sapiens 96.6 1478
XP_001109429.2 PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like M. mulatta 96.3 1478
XP_003919728.1 PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2 P. anubis 96.3 1478
NP_034548.2 Herc2 gene product M. musculus 92.0 1478
XP_686789.5 PREDICTED: e3 ubiquitin-protein ligase HERC2, partial D. rerio 77.9 1478
NP_608388.2 HERC2 D. melanogaster 46.3 164
Other hits (2 of 28) [Show all]SpeciesId(%)Len(aa)
XP_003952667.1 PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2-like P. troglodytes 95.7 1471
XP_536160.2 PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 C. lupus familiaris 93.4 1478

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; mixed; uterus; uncharacterized tissue; embryonic tissue; pancreas; vascular; placenta; testis; lymph node; muscle; stomach; intestine; prostate; eye; liver; skin; mammary gland; kidney; mouth; connective tissue; adrenal gland; parathyroid; nerve; thymus; ovary; bone; blood; thyroid; trachea; larynx; lymph; bladder; heart; cervix; ear; amniotic fluid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 15
Map position: 15q11.2
UniSTS entry: Chr 15 D15S1276
UniSTS entry: Chr 15 G20670
UniSTS entry: Chr 15 A006B10
UniSTS entry: Chr 15 RH66620
UniSTS entry: Chr 1 D8S2278
UniSTS entry: Chr 1 D11S3316
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

AF041080.1 Homo sapiens D15F37 pseudogene, S3 allele, mRNA sequence PA
CR749409.1 Homo sapiens mRNA; cDNA DKFZp781N1423 (from clone DKFZp781N1423) PA
AL512684.1 Homo sapiens mRNA; cDNA DKFZp547I082 (from clone DKFZp547I082) A
AK095014.1 Homo sapiens cDNA FLJ37695 fis, clone BRHIP2015245, highly similar to Homo sapiens HERC2 (HERC2) mRNA P
NR_002824.3 Homo sapiens hect domain and RLD 2 pseudogene 2 (HERC2P2), non-coding RNA P
AB002391.2 Homo sapiens mRNA for KIAA0393 protein, partial cds P

EST sequences (10 of 333) [Show all sequences]

AA905274.1 Clone IMAGE:1506128 mixed 3' read A
AA976147.1 Clone IMAGE:1556206 uncharacterized tissue 3' read
AA976169.1 Clone IMAGE:1556231 uncharacterized tissue 3' read
AA906416.1 Clone IMAGE:1506807 mixed 3' read A
AI073465.1 Clone IMAGE:1640242 testis 3' read
R21407.1 Clone IMAGE:130076 placenta 5' read
AI139810.1 Clone IMAGE:1737420 testis 3' read A
CB068427.1 Clone IMAGE:6365250 pancreas 3' read A
AI192918.1 Clone IMAGE:1743710 lung 3' read A
AI221783.1 Clone IMAGE:1843277 mixed 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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