> Ribosomal protein SA (RPSA)
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UGID:618872     UniGene Hs.449909     Homo sapiens (human)   RPSA Order cDNA clone, Links
Ribosomal protein SA (RPSA)

Human protein-coding gene RPSA. Represented by 5883 ESTs from 689 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 618872 - Hs.449909]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001083716.2 PREDICTED: 40S ribosomal protein SA isoform 11 M. mulatta 100.0 299
NP_035159.3 40S ribosomal protein SA M. musculus 100.0 294
NP_058834.1 Rpsa gene product R. norvegicus 100.0 294
XP_001368957.1 PREDICTED: 40S ribosomal protein SA-like M. domestica 100.0 294
NP_001091273.1 uncharacterized protein LOC100037080 X. laevis 100.0 294
XP_001516915.1 PREDICTED: 40S ribosomal protein SA-like O. anatinus 100.0 294
XP_003894692.1 PREDICTED: 40S ribosomal protein SA P. anubis 100.0 294
XP_001172054.1 PREDICTED: 40S ribosomal protein SA isoform 1 P. troglodytes 100.0 294
NP_001012321.1 RPSA gene product H. sapiens 100.0 294
NP_001239159.1 ribosomal protein SA C. lupus familiaris 100.0 294
NP_001137423.1 RPSA gene product E. caballus 100.0 294
NP_001032223.1 RPSA gene product S. scrofa 100.0 294
NP_001098733.1 LOC100125628 gene product O. aries 100.0 294
XP_002712810.1 PREDICTED: ribosomal protein SA-like O. cuniculus 100.0 294
XP_003224007.1 PREDICTED: 40S ribosomal protein SA-like A. carolinensis 99.7 295
NP_001232377.1 LAMR gene product T. guttata 99.7 295
NP_001007824.1 RPSA gene product G. gallus 99.7 295
XP_003207311.1 PREDICTED: 40S ribosomal protein SA-like M. gallopavo 99.7 295
NP_776804.1 RPSA gene product B. taurus 99.7 294
NP_957346.1 rpsa gene product D. rerio 95.1 307
NP_476750.1 stubarista, isoform A D. melanogaster 79.0 266
NP_011730.1 ribosomal 40S subunit protein S0A S. cerevisiae 68.7 248
NP_497978.1 Protein RPS-0 C. elegans 68.1 275
XP_956840.1 40S ribosomal protein S0 N. crassa 68.1 287
XP_001702485.1 ribosomal protein Sa, component of cytosolic 80S ribosome and 40S small subunit C. reinhardtii 65.2 278
NP_177381.1 40S ribosomal protein Sa-1 A. thaliana 64.5 295
Other hits (2 of 48) [Show all]SpeciesId(%)Len(aa)
NP_989068.1 rpsa gene product X. tropicalis 97.4 305
XP_003443122.1 PREDICTED: 40S ribosomal protein SA-like O. niloticus 95.4 306

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: lung; embryonic tissue; brain; eye; intestine; skin; uterus; pancreas; liver; placenta; uncharacterized tissue; lymph; prostate; testis; bone; ovary; mammary gland; cervix; muscle; stomach; mixed; kidney; connective tissue; epididymis; lymph node; blood; tonsil; ascites; bone marrow; umbilical cord; heart; bladder; vascular; salivary gland; mouth; spleen; adrenal gland; thymus; parathyroid; nerve; pharynx; thyroid; trachea; amniotic fluid; esophagus; larynx; adipose tissue; pituitary gland; pineal gland; ear
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 3
Map position: 3p22.2
UniSTS entry: Chr 1 fa91h01.x1
UniSTS entry: Chr 1 D3S3955
UniSTS entry: Chr 1 LAMR1_459
UniSTS entry: Chr 3 RH92628
UniSTS entry: Chr 5 D5S1572E
UniSTS entry: Chr 3 RP_SA_1 [Map Viewer]
UniSTS entry: Chr 3 G59752
UniSTS entry: Chr 11 D11S813E
UniSTS entry: Chr 11 D11S813E
UniSTS entry: Chr 11 REN116494
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (30)

M14199.1 Human laminin receptor (2H5 epitope) mRNA, 5' end P
BT007219.1 Homo sapiens laminin receptor 1 (ribosomal protein SA, 67kDa) mRNA, complete cds P
BC050688.1 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:60265 IMAGE:4443949), complete cds PA
BC053370.1 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:61620 IMAGE:5108337), complete cds PA
NM_002295.4 Homo sapiens ribosomal protein SA (RPSA), transcript variant 1, mRNA PA
L07383.1 Homo sapiens E2 small nucleolar RNA
BC062714.1 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:72006 IMAGE:3686924), complete cds PA
BC066941.1 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:87296 IMAGE:4820432), complete cds PA
BC068062.1 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:78527 IMAGE:5427114), complete cds PA
BC070263.1 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:88252 IMAGE:3996864), complete cds PA
BC071968.1 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:88664 IMAGE:5814758), complete cds PA
BC071693.1 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:87940 IMAGE:3884457), complete cds PA
BC071969.1 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:88665 IMAGE:6483856), complete cds PA
BC071970.1 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:88666 IMAGE:6484091), complete cds PA
BC073863.1 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:90285 IMAGE:3924066), complete cds PA
NM_001012321.1 Homo sapiens ribosomal protein SA (RPSA), transcript variant 2, mRNA PA
NR_002324.1 Homo sapiens small nucleolar RNA, H/ACA box 62 (SNORA62), small nucleolar RNA
BC107567.1 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:104342 IMAGE:3681016), complete cds PA
BC005391.1 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:12521 IMAGE:3997019), complete cds PA
BC008867.2 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:16750 IMAGE:4130936), complete cds PA
BC010418.2 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:16557 IMAGE:4079845), complete cds PA
BC010054.1 Homo sapiens ribosomal protein SA, mRNA (cDNA clone IMAGE:3845335) PA
BC013827.2 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:17122 IMAGE:3446816), complete cds PA
AF503367.1 Homo sapiens multidrug resistance-associated protein MGr1-Ag mRNA, complete cds PA
BC034537.1 Homo sapiens ribosomal protein SA, mRNA (cDNA clone MGC:17506 IMAGE:3455545), complete cds PA
BC018867.2 Homo sapiens ribosomal protein SA, mRNA (cDNA clone IMAGE:3141130) PA
J03799.1 Human colin carcinoma laminin-binding protein mRNA, complete cds P
X15005.1 Human mRNA for potential laminin-binding protein (nem/1cHD4) P
S37431.1 67 kda laminin receptor [human, lung cancer cell line SBC3, mRNA, 936 nt] P
X61156.1 H.sapiens mRNA for laminin-binding protein P

EST sequences (10 of 5883) [Show all sequences]

AA954201.1 Clone IMAGE:1575073 kidney 3' read A
AA954215.1 Clone IMAGE:1575116 kidney 3' read A
AA862694.1 Clone IMAGE:1469086 uncharacterized tissue 3' read PA
AA865538.1 Clone IMAGE:1459330 kidney 3' read PA
AA866094.1 Clone IMAGE:1459547 kidney 3' read A
AA864597.1 Clone IMAGE:1459433 kidney 3' read PA
AA961404.1 Clone IMAGE:1597860 uncharacterized tissue 3' read PA
AA961426.1 Clone IMAGE:1599543 uncharacterized tissue 3' read A
AA961569.1 Clone IMAGE:1592623 kidney 3' read PA
AA961833.1 Clone IMAGE:1600305 uncharacterized tissue 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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