> H3 histone, family 3C (H3F3C)
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UGID:617660     UniGene Hs.448697     Homo sapiens (human)   H3F3C Order cDNA clone, Links
H3 histone, family 3C (H3F3C)

Human protein-coding gene H3F3C. Represented by 544 ESTs from 178 cDNA libraries. Corresponds to reference sequence NM_001013699.2. [UniGene 617660 - Hs.448697]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_032236.1 H3f3a gene product M. musculus 100.0 135
XP_002732446.1 PREDICTED: histone H3.3B-like isoform 1 S. kowalevskii 100.0 135
XP_001368225.1 PREDICTED: histone H3.3-like M. domestica 100.0 135
XP_003216117.1 PREDICTED: histone H3.3-like A. carolinensis 100.0 135
XP_003400767.1 PREDICTED: histone H3.3-like B. terrestris 100.0 135
XP_003961353.1 PREDICTED: histone H3.3-like T. rubripes 100.0 135
XP_003386893.1 PREDICTED: histone H3.3-like A. queenslandica 100.0 135
XP_001623766.1 predicted protein N. vectensis 100.0 135
NP_001184227.1 LOC100224650 gene product T. guttata 100.0 135
XP_002154470.1 PREDICTED: histone H3.3-like H. magnipapillata 100.0 135
XP_002579313.1 histone H3 S. mansoni 100.0 135
NP_509344.1 Protein HIS-71 C. elegans 100.0 135
NP_001191424.1 histone 3 A. californica 100.0 135
XP_002399568.1 Core histone H2A/H2B/H3/H4 I. scapularis 100.0 135
XP_001949472.1 PREDICTED: histone H3.3-like A. pisum 100.0 135
XP_975889.1 PREDICTED: similar to Histone H3.3B CG8989-PA isoform 2 T. castaneum 100.0 135
NP_001091756.1 h3 histone family 3a B. mori 100.0 135
XP_001657554.1 histone H3.3 A. aegypti 100.0 135
XP_321242.1 AGAP001813-PA A. gambiae 100.0 135
XP_001867328.1 histone H3.3 type 2 C. quinquefasciatus 100.0 135
NP_511095.1 histone H3.3B, isoform A D. melanogaster 100.0 135
XP_002078203.1 GD23319 D. simulans 100.0 135
XP_001608166.1 PREDICTED: histone H3.3-like isoform 2 N. vitripennis 100.0 135
XP_001120696.1 PREDICTED: histone H3.3-like isoform 1 A. mellifera 100.0 135
XP_791401.1 PREDICTED: histone H3.3-like S. purpuratus 100.0 135
XP_002119783.1 PREDICTED: histone H3.3-like C. intestinalis 100.0 135
XP_002589240.1 hypothetical protein BRAFLDRAFT_120760 B. floridae 100.0 135
XP_002664801.1 PREDICTED: histone H3.3-like isoform 2 D. rerio 100.0 135
XP_004080398.1 PREDICTED: histone H3.3-like O. latipes 100.0 135
XP_003438715.1 PREDICTED: histone H3.3-like O. niloticus 100.0 135
NP_001080065.1 H3 histone, family 3B (H3.3B) X. laevis 100.0 135
XP_002940033.1 PREDICTED: histone H3.3 X. tropicalis 100.0 135
XP_003643522.1 PREDICTED: histone H3.3-like G. gallus 100.0 135
XP_003211494.1 PREDICTED: histone H3.3-like M. gallopavo 100.0 135
XP_001091581.1 PREDICTED: histone H3.3-like isoform 1 M. mulatta 100.0 135
NP_001162389.1 histone H3.1 P. anubis 100.0 135
NP_001092038.1 HIST1H3A gene product P. troglodytes 100.0 135
NP_002098.1 H3F3A gene product H. sapiens 100.0 135
XP_537232.1 PREDICTED: histone H3.3 isoform 1 C. lupus familiaris 100.0 135
XP_001495110.1 PREDICTED: histone H3.3-like isoform 1 E. caballus 100.0 135
XP_003131242.1 PREDICTED: histone H3.3-like S. scrofa 100.0 135
NP_001229500.1 H3F3B gene product B. taurus 100.0 135
XP_004013172.1 PREDICTED: histone H3.3 O. aries 100.0 135
NP_001164583.1 H3.3A gene product O. cuniculus 100.0 135
NP_189372.1 histone H3 A. thaliana 95.6 135
NP_009564.1 Hht1p S. cerevisiae 95.6 135
XP_956003.1 histone H3 N. crassa 95.6 135
XP_001690671.1 histone H3 C. reinhardtii 95.6 134
Other hits (2 of 28) [Show all]SpeciesId(%)Len(aa)
XP_002999294.1 histone, putative P. infestans 97.8 135
XP_001514437.1 PREDICTED: histone H3.2-like O. anatinus 97.8 135

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; embryonic tissue; pancreas; skin; pharynx; testis; lung; eye; muscle; intestine; lymph; prostate; uterus; mammary gland; uncharacterized tissue; esophagus; liver; placenta; connective tissue; vascular; cervix; spleen; trachea; epididymis; bladder; kidney; lymph node; ascites; ovary; stomach; mixed; bone marrow; tonsil; adrenal gland; blood; adipose tissue; mouth; bone; larynx; pineal gland; thyroid
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 12
Map position: 12p11.21
UniSTS entry: Chr 17 RH47096 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

BC066906.1 Homo sapiens histone H3-like, mRNA (cDNA clone MGC:87082 IMAGE:5267388), complete cds PA
NM_001013699.2 Homo sapiens H3 histone, family 3C (H3F3C), mRNA P
HQ873957.1 Homo sapiens histone variant H3.5 (H3F3C) mRNA, complete cds P

EST sequences (10 of 544) [Show all sequences]

AI016942.1 Clone IMAGE:1639163 testis 3' read
CB068643.1 Clone IMAGE:6554156 pancreas 3' read PA
CB069908.1 Clone IMAGE:6554156 pancreas 5' read P
CB070121.1 Clone IMAGE:6553480 pancreas 5' read P
CB070195.1 Clone IMAGE:6553541 pancreas 5' read P
CB146413.1 Clone L16HLK3-8-E10 liver 5' read P
CB159519.1 Clone L18POOL1n1-39-F07 liver 5' read P
CB107319.1 Clone L4SNU368-1-G06 liver 5' read P
CB110231.1 Clone L4SNU368-14-C07 liver 5' read P
CB120501.1 Clone L8SCK0-35-D02 liver 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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