> Nerve growth factor receptor (TNFRSF16) associated protein 1 (NGFRAP1)
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UGID:617551     UniGene Hs.448588     Homo sapiens (human)   NGFRAP1 Order cDNA clone, Links
Nerve growth factor receptor (TNFRSF16) associated protein 1 (NGFRAP1)

Human protein-coding gene NGFRAP1. Represented by 874 ESTs from 250 cDNA libraries. Corresponds to 3 reference sequences (different isoforms). [UniGene 617551 - Hs.448588]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_002806383.1 PREDICTED: protein BEX3-like isoform 1 M. mulatta 100.0 110
XP_001136975.1 PREDICTED: uncharacterized protein LOC465780 isoform 3 P. troglodytes 100.0 110
NP_996798.1 NGFRAP1 gene product H. sapiens 100.0 110
NP_001103703.1 Ngfrap1 gene product M. musculus 91.1 123
Other hits (2 of 8) [Show all]SpeciesId(%)Len(aa)
NP_001231756.1 nerve growth factor receptor (TNFRSF16) associated protein 1 isoform b S. scrofa 98.2 110
XP_003435675.1 PREDICTED: protein BEX3 C. lupus familiaris 97.3 111

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; pancreas; placenta; lung; embryonic tissue; prostate; skin; testis; eye; heart; mixed; uterus; liver; uncharacterized tissue; ovary; pituitary gland; kidney; thyroid; pharynx; mammary gland; adrenal gland; intestine; connective tissue; muscle; parathyroid; ear; bladder; pineal gland; larynx; bone; lymph node; amniotic fluid; bone marrow; spleen; salivary gland; nerve; umbilical cord; blood; epididymis; ascites; vascular
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: X
Map position: Xq22.2
UniSTS entry: Chr X DXS6984E
UniSTS entry: Chr X STS-M38188
UniSTS entry: Chr X D5S2593
UniSTS entry: Ngfrap1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (10)

BC051713.1 Homo sapiens nerve growth factor receptor (TNFRSF16) associated protein 1, mRNA (cDNA clone IMAGE:5303642) PA
NM_206917.1 Homo sapiens nerve growth factor receptor (TNFRSF16) associated protein 1 (NGFRAP1), transcript variant 1, mRNA PA
NM_206915.1 Homo sapiens nerve growth factor receptor (TNFRSF16) associated protein 1 (NGFRAP1), transcript variant 2, mRNA PA
NM_014380.1 Homo sapiens nerve growth factor receptor (TNFRSF16) associated protein 1 (NGFRAP1), transcript variant 3, mRNA P
AF187064.1 Homo sapiens p75NTR-associated cell death executor (NADE) mRNA, complete cds P
AY833562.1 Homo sapiens chromosome X brain expressed X-linked 3 (BEX3) mRNA, complete cds PA
BC003190.1 Homo sapiens nerve growth factor receptor (TNFRSF16) associated protein 1, mRNA (cDNA clone MGC:802 IMAGE:3357965), complete cds PA
AK315371.1 Homo sapiens cDNA, FLJ96417, Homo sapiens nerve growth factor receptor (TNFRSF16) associatedprotein 1 (NGFRAP1), mRNA P
M38188.1 Homo sapiens unknown mRNAs P
AK057859.1 Homo sapiens cDNA FLJ25130 fis, clone CBR06630, highly similar to OVARIAN GRANULOSA CELL 13.0 KDA PROTEIN HGR74 P

EST sequences (10 of 874) [Show all sequences]

AA954115.1 Clone IMAGE:1591225 kidney 3' read A
AA961519.1 Clone IMAGE:1592525 kidney 3' read A
AA973653.1 Clone IMAGE:1569427 lung 3' read A
AA987463.1 Clone IMAGE:1601630 lung 3' read
AI001111.1 Clone IMAGE:1613188 uncharacterized tissue 3' read A
AI025881.1 Clone IMAGE:1646619 parathyroid 3' read PA
AI033728.1 Clone IMAGE:1663479 skin 3' read PA
AI033984.1 Clone IMAGE:1646678 parathyroid 3' read P
AI042237.1 Clone IMAGE:1664960 skin 3' read
AI075989.1 Clone IMAGE:1640433 testis 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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