> Zinc finger with KRAB and SCAN domains 4 (ZKSCAN4)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:137266     UniGene Hs.44720     Homo sapiens (human)   ZKSCAN4 Order cDNA clone, Links
Zinc finger with KRAB and SCAN domains 4 (ZKSCAN4)

Human protein-coding gene ZKSCAN4. Represented by 95 ESTs from 67 cDNA libraries. Corresponds to reference sequence NM_019110.3. [UniGene 137266 - Hs.44720]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_061983.2 ZKSCAN4 gene product H. sapiens 100.0 544
NP_076174.3 Zkscan3 gene product M. musculus 76.8 534
NP_001089539.1 zinc finger protein 33A X. laevis 52.3 176
NP_001014498.1 CG1832, isoform B D. melanogaster 48.8 166
XP_003198406.1 PREDICTED: gastrula zinc finger protein XlCGF57.1-like D. rerio 47.5 221
Other hits (2 of 35) [Show all]SpeciesId(%)Len(aa)
XP_527296.1 PREDICTED: zinc finger protein with KRAB and SCAN domains 4 isoform 5 P. troglodytes 99.5 545
XP_003897288.1 PREDICTED: zinc finger protein with KRAB and SCAN domains 4 P. anubis 96.5 544

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; blood; embryonic tissue; lung; mixed; kidney; skin; eye; cervix; uterus; mammary gland; stomach; mouth; heart; spleen; prostate; trachea; tonsil; connective tissue; uncharacterized tissue; bone; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p21
UniSTS entry: Chr 6 RH103276
UniSTS entry: Chr 6 STS-N35344 [Map Viewer]
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (5)

AY781778.1 Homo sapiens zinc finger protein 307 mRNA, complete cds PA
NM_019110.3 Homo sapiens zinc finger with KRAB and SCAN domains 4 (ZKSCAN4), mRNA PA
BC014031.2 Homo sapiens zinc finger with KRAB and SCAN domains 4, mRNA (cDNA clone MGC:20459 IMAGE:4336904), complete cds PA
AK315783.1 Homo sapiens cDNA, FLJ96899 P
AK302017.1 Homo sapiens cDNA FLJ57654 complete cds, highly similar to Zinc finger protein 307 P

EST sequences (10 of 95) [Show all sequences]

AI139333.1 Clone IMAGE:1710233 uterus 3' read A
AI215747.1 Clone IMAGE:1884165 lung 3' read A
AI634553.1 Clone IMAGE:2273242 lung 3' read
AI758230.1 Clone IMAGE:2284031 kidney 3' read A
AI807577.1 Clone IMAGE:2343838 lung 3' read
AL040316.1 Clone DKFZp434M2213 testis 5' read P
AL040317.1 Clone DKFZp434M2213 testis 3' read A
AI830652.1 Clone IMAGE:2402403 kidney 3' read A
BX390713.2 Clone CS0DK008YF08 cervix 5' read P
BX350505.1 Clone CS0DK008YF08 cervix 3' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help