> Prefoldin subunit 6 (PFDN6)
NCBI UniGene banner graphic
PubMed Nucleotide Protein Genome Structure Popset Taxonomy
 Search
NCBI

UniGene
Homepage
FAQs
Help
Query Tips
Build Info
Library Browser
DDD
Download UniGene

Related Databases
Gene
HomoloGene
EST
SRA

NIH cDNA Projects
MGC | ZGC | XGC
Finding cDNAs
UGID:241411     UniGene Hs.446374     Homo sapiens (human)   PFDN6 Order cDNA clone, Links
Prefoldin subunit 6 (PFDN6)

Human protein-coding gene PFDN6. Represented by 178 ESTs from 101 cDNA libraries. Corresponds to 4 reference sequences (different isoforms). [UniGene 241411 - Hs.446374]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001116232.1 PREDICTED: prefoldin subunit 6-like isoform 1 M. mulatta 100.0 128
XP_003897492.1 PREDICTED: prefoldin subunit 6 P. anubis 100.0 128
XP_527361.1 PREDICTED: prefoldin subunit 6 isoform 2 P. troglodytes 100.0 128
NP_001172110.1 PFDN6 gene product H. sapiens 100.0 128
NP_001041554.1 PFDN6 gene product C. lupus familiaris 100.0 128
XP_001497197.1 PREDICTED: prefoldin subunit 6-like E. caballus 100.0 128
NP_001172108.1 PFDN6 gene product S. scrofa 100.0 128
NP_001068889.1 PFDN6 gene product B. taurus 100.0 128
XP_002714586.1 PREDICTED: HLA class II region expressed gene KE2 O. cuniculus 100.0 128
NP_001172111.1 H2-Ke2 gene product M. musculus 100.0 126
NP_001158190.1 Pfdn6 gene product R. norvegicus 100.0 126
NP_956807.1 pfdn6 gene product D. rerio 77.0 125
NP_001090418.1 prefoldin subunit 6 X. laevis 71.4 119
Other hits (2 of 9) [Show all]SpeciesId(%)Len(aa)
XP_004018799.1 PREDICTED: prefoldin subunit 6 isoform 1 O. aries 98.0 148
XP_001369480.1 PREDICTED: prefoldin subunit 6-like M. domestica 96.1 128

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: placenta; embryonic tissue; lung; testis; skin; mammary gland; brain; mouth; prostate; stomach; bone marrow; liver; thyroid; kidney; lymph; pancreas; adrenal gland; spleen; trachea; thymus; eye; blood; ascites; uterus; uncharacterized tissue; mixed; parathyroid; intestine; ovary; lymph node; salivary gland; muscle
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6p21.3
UniSTS entry: MARC_1913-1914:991931657:2
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (7)

BC059783.1 Homo sapiens prefoldin subunit 6, mRNA (cDNA clone MGC:70744 IMAGE:5415221), complete cds PA
NM_014260.3 Homo sapiens prefoldin subunit 6 (PFDN6), transcript variant 2, mRNA PA
AK312150.1 Homo sapiens cDNA, FLJ92435, Homo sapiens HLA class II region expressed gene KE2 (HKE2), mRNA P
NM_001185181.2 Homo sapiens prefoldin subunit 6 (PFDN6), transcript variant 1, mRNA PA
NM_001265596.1 Homo sapiens prefoldin subunit 6 (PFDN6), transcript variant 4, mRNA PA
NM_001265595.1 Homo sapiens prefoldin subunit 6 (PFDN6), transcript variant 3, mRNA PA
BC039033.1 Homo sapiens prefoldin subunit 6, mRNA (cDNA clone MGC:47665 IMAGE:5748799), complete cds PA

EST sequences (10 of 178) [Show all sequences]

AI027903.1 Clone IMAGE:1650488 parathyroid 3' read A
AI031905.1 Clone IMAGE:1649990 parathyroid 3' read A
AI032773.1 Clone IMAGE:1647048 parathyroid 3' read A
AI144022.1 Clone IMAGE:1698071 uterus 3' read A
AI183913.1 Clone IMAGE:1739852 lung 3' read A
AI184479.1 Clone IMAGE:1740136 lung 3' read A
AI186734.1 Clone IMAGE:1745175 lung 3' read
CB124036.1 Clone L5HLK1s1-4-E02 liver 5' read P
AA887882.1 Clone IMAGE:1160469 intestine 3' read A
AI201243.1 Clone IMAGE:1755401 testis 3' read PA


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
NLM | NIH | UniGene | Privacy Statement | Disclaimer | NCBI Help