> Transient receptor potential cation channel, subfamily V, member 3 (TRPV3)
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UGID:241292     UniGene Hs.446255     Homo sapiens (human)   TRPV3 Order cDNA clone, Links
Transient receptor potential cation channel, subfamily V, member 3 (TRPV3)

Human protein-coding gene TRPV3. Represented by 41 ESTs from 28 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 241292 - Hs.446255]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001245134.1 TRPV3 gene product H. sapiens 100.0 790
NP_659567.2 Trpv3 gene product M. musculus 95.7 790
NP_001036195.1 trpv4 gene product D. rerio 50.5 559
NP_001177322.1 transient receptor potential cation channel, subfamily V, member 1 X. laevis 50.4 645
Other hits (2 of 21) [Show all]SpeciesId(%)Len(aa)
XP_003952990.1 PREDICTED: LOW QUALITY PROTEIN: transient receptor potential cation channel subfamily V member 3 P. troglodytes 98.8 760
XP_003912148.1 PREDICTED: transient receptor potential cation channel subfamily V member 3-like P. anubis 98.7 773

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; eye; uncharacterized tissue; intestine; mixed; muscle; parathyroid; prostate; kidney; uterus; ganglia; liver
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 17
Map position: 17p13.2
UniSTS entry: Chr 17 TRPV3__5144
UniSTS entry: Chr 1 D10S16
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (21)

BX537539.1 Homo sapiens mRNA; cDNA DKFZp686A1130 (from clone DKFZp686A1130) PA
AK127726.1 Homo sapiens cDNA FLJ45826 fis, clone NT2RP8003787, highly similar to Transient receptor potential cation channel subfamily V member 3 P
AK127330.1 Homo sapiens cDNA FLJ45401 fis, clone BRHIP3028742, highly similar to Transient receptor potential cation channel subfamily V member 3 P
BC104868.1 Homo sapiens transient receptor potential cation channel, subfamily V, member 3, mRNA (cDNA clone MGC:132528 IMAGE:8143871), complete cds P
BC104866.1 Homo sapiens transient receptor potential cation channel, subfamily V, member 3, mRNA (cDNA clone MGC:132526 IMAGE:8143869), complete cds P
EU295940.1 Homo sapiens transient receptor potential cation channel subfamily V member 3 (TRPV3) mRNA, complete cds P
AF514998.1 Homo sapiens cation channel TRPV3 mRNA, complete cds P
AJ487035.2 Homo sapiens mRNA for vanilloid receptor-like 3 (TRPV3 gene) P
AK092557.1 Homo sapiens cDNA FLJ35238 fis, clone PROST2001805
NM_145068.3 Homo sapiens transient receptor potential cation channel, subfamily V, member 3 (TRPV3), transcript variant 2, mRNA PA
AK304768.1 Homo sapiens cDNA FLJ59153 complete cds, highly similar to Transient receptor potential cation channel subfamily V member 3 P
AY118268.1 Homo sapiens vanilloid receptor like 3 protein splice variant a (TRPV3) mRNA, complete cds, alternatively spliced PA
AY118267.1 Homo sapiens vanilloid receptor like 3 protein splice variant b (TRPV3) mRNA, complete cds, alternatively spliced PA
BC143330.1 Homo sapiens transient receptor potential cation channel, subfamily V, member 3, mRNA (cDNA clone MGC:176852 IMAGE:9051835), complete cds P
BC143295.1 Homo sapiens cDNA clone IMAGE:9051798 P
BC143336.1 Homo sapiens cDNA clone IMAGE:9051841, containing frame-shift errors P
BC143334.1 Homo sapiens cDNA clone IMAGE:9051839 P
BC143333.1 Homo sapiens cDNA clone IMAGE:9051838 P
BC143299.1 Homo sapiens transient receptor potential cation channel, subfamily V, member 3, mRNA (cDNA clone MGC:176820 IMAGE:9051803), complete cds P
BC143294.1 Homo sapiens transient receptor potential cation channel, subfamily V, member 3, mRNA (cDNA clone MGC:176814 IMAGE:9051797), complete cds P
NM_001258205.1 Homo sapiens transient receptor potential cation channel, subfamily V, member 3 (TRPV3), transcript variant 1, mRNA PA

EST sequences (10 of 41) [Show all sequences]

AI168031.1 Clone IMAGE:1682827 parathyroid 3' read A
CD518643.1 Clone IMAGE:30398110 brain 5' read
BX509551.1 Clone DKFZp686A1130 muscle 5' read P
BX509552.1 Clone DKFZp686A1130 muscle 3' read
BP431662.1 Clone LEU0631_15_E3
AW268620.1 Clone IMAGE:2815706 mixed 3' read A
AW850160.1 intestine
AW899117.1 brain
BP349122.1 Clone SZR03242 brain 5' read P
CR991969.1 Clone RZPDp9016I1525 uncharacterized tissue 5' read P


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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