Myb/SANT-like DNA-binding domain containing 1 (MSANTD1)

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UGID:237328 UniGene Hs.442291 Homo sapiens (human) MSANTD1

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Myb/SANT-like DNA-binding domain containing 1 (MSANTD1)

Human protein-coding gene MSANTD1. Represented by 15 ESTs from 10 cDNA libraries. Corresponds to reference sequence NM_001042690.1. [UniGene 237328 - Hs.442291]

SELECTED PROTEIN SIMILARITIES

Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.

Best Hits and Hits from model organisms		Species	Id(%)	Len(aa)
XP_001152822.2 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: myb/SANT-like DNA-binding domain-containing protein 1 isoform 1	P. troglodytes	100.0	277
NP_001036155.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	MSANTD1 gene product	H. sapiens	100.0	277
NP_997160.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Msantd1 gene product	M. musculus	91.7	277
XP_001338937.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: uncharacterized protein C4orf44 homolog	D. rerio	50.8	246
Other hits (2 of 18) [Show all]		Species	Id(%)	Len(aa)
XP_003890912.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	PREDICTED: myb/SANT-like DNA-binding domain-containing protein 1	P. anubis	98.9	264
NP_001102559.1 Conserved domains (CDD) Gene summary Protein sequence Protein/EST matches (ProtEST) Protein/protein matches (BLink)	Myb/SANT-like DNA-binding domain containing 1	R. norvegicus	92.1	277

GENE EXPRESSION

Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.

	EST Profile:	Approximate expression patterns inferred from EST sources. [Show more entries with profiles like this]
	GEO Profiles:	Experimental gene expression data (Gene Expression Omnibus).
	cDNA Sources:	uncharacterized tissue; brain; uterus; spleen; testis; eye; pancreas

MAPPING POSITION

Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.

	Chromosome:	4
	Map position:	4p16.3

SEQUENCES

Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (3)

BC043530.1	Homo sapiens hypothetical gene supported by BC043530, mRNA (cDNA clone IMAGE:5168535)	PA
NM_001042690.1	Homo sapiens Myb/SANT-like DNA-binding domain containing 1 (MSANTD1), mRNA	P
BC148247.1	Homo sapiens cDNA clone IMAGE:40132845	P

EST sequences (15)

AI084202.1	Clone IMAGE:1751293	brain	3' read	A
AI699506.1	Clone IMAGE:2240941	uncharacterized tissue	3' read	A
AI939362.1	Clone IMAGE:1751293	brain	3' read	A
AI638012.1	Clone IMAGE:2239958	uncharacterized tissue	3' read	A
AW025646.1	Clone IMAGE:2516164	uncharacterized tissue	3' read	A
AW451759.1	Clone IMAGE:2736586	uncharacterized tissue	3' read	A
CK902132.1	Clone IMAGE:6030284	pancreas	5' read
BE883961.1	Clone IMAGE:3907338	uterus	5' read
DR006756.1	Clone TC105012	spleen	5' read	P
L34977.1	Clone Y16	brain		P
AV732579.1	Clone HTFANC07	brain	5' read
DB094043.1	Clone TESTI4044234	testis	5' read	P
BQ185297.1	Clone UI-E-EJ1-aju-b-05-0-UI	eye	3' read	A
BQ188122.1	Clone UI-E-EJ1-aju-b-05-0-UI	eye	5' read	A
BQ631148.1	Clone IMAGE:6030284	pancreas	3' read	A

Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria