> Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C (APOBEC3C)
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UGID:236161     UniGene Hs.441124     Homo sapiens (human)   APOBEC3C Order cDNA clone, Links
Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C (APOBEC3C)

Human protein-coding gene APOBEC3C. Represented by 271 ESTs from 128 cDNA libraries. Corresponds to reference sequence NM_014508.2. [UniGene 236161 - Hs.441124]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_055323.2 APOBEC3C gene product H. sapiens 100.0 189
NP_001153887.1 Apobec3 gene product M. musculus 47.2 212
Other hits (2 of 8) [Show all]SpeciesId(%)Len(aa)
NP_001238839.1 probable DNA dC->dU-editing enzyme APOBEC-3C P. troglodytes 98.4 189
NP_001107831.1 APOBEC3C gene product M. mulatta 87.9 189

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: testis; skin; placenta; intestine; blood; lung; eye; kidney; bone marrow; uterus; prostate; connective tissue; amniotic fluid; vascular; trachea; bladder; tonsil; salivary gland; ovary; ascites; liver; mixed; lymph; pancreas; adrenal gland; brain; pharynx; mammary gland; uncharacterized tissue; lymph node; muscle; embryonic tissue; spleen; larynx; bone; esophagus; ganglia; heart; thymus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 22
Map position: 22q13.1
UniSTS entry: G60296
UniSTS entry: Chr 22 STS-N58010 [Map Viewer]
UniSTS entry: Chr 22 APOBEC3C__4342
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (8)

CR456394.1 Homo sapiens bK150C2.3 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.bK150C2.3) P
AF165520.1 Homo sapiens phorbolin I protein (PBI) mRNA, complete cds PA
AB208979.1 Homo sapiens mRNA for apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C variant protein P
BC011739.2 Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C, mRNA (cDNA clone MGC:19485 IMAGE:4331363), complete cds PA
AK313272.1 Homo sapiens cDNA, FLJ93783, Homo sapiens apolipoprotein B mRNA editing enzyme, catalyticpolypeptide-like 3C (APOBEC3C), mRNA P
NM_014508.2 Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C (APOBEC3C), mRNA PA
BC021080.1 Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C, mRNA (cDNA clone IMAGE:3543072) PA
BC007954.2 Homo sapiens cDNA clone IMAGE:4302702, partial cds A

EST sequences (10 of 271) [Show all sequences]

AA864496.1 Clone IMAGE:1460130 kidney 3' read
R23156.1 Clone IMAGE:131015 placenta 3' read
AI129243.1 Clone IMAGE:1711869 uterus 3' read
CB107121.1 Clone L3SNU475-13-E07 liver 5' read P
CB106890.1 Clone L3SNU475-8-C01 liver 5' read P
CB140277.1 Clone L15CKK1-20-F11 liver 5' read P
CB140229.1 Clone L15CKK1-20-A12 liver 5' read P
CB141542.1 Clone L15CKK1-28-C06 liver 5' read P
CB148457.1 Clone L15CKK1-41-A05 liver 5' read P
AI589063.1 Clone IMAGE:2105587 brain 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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