> DEAD (Asp-Glu-Ala-Asp) box helicase 1 (DDX1)
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UGID:235636     UniGene Hs.440599     Homo sapiens (human)   DDX1 Order cDNA clone, Links
DEAD (Asp-Glu-Ala-Asp) box helicase 1 (DDX1)

Human protein-coding gene DDX1. Represented by 1323 ESTs from 363 cDNA libraries. EST representation biased toward infant. Corresponds to reference sequence NM_004939.2. [UniGene 235636 - Hs.440599]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001162067.2 PREDICTED: ATP-dependent RNA helicase DDX1 isoform 4 P. troglodytes 100.0 739
NP_004930.1 DDX1 gene product H. sapiens 100.0 739
XP_001090643.1 PREDICTED: ATP-dependent RNA helicase DDX1 isoform 1 M. mulatta 99.9 739
XP_003908346.1 PREDICTED: ATP-dependent RNA helicase DDX1-like, partial P. anubis 99.8 466
NP_598801.1 ATP-dependent RNA helicase DDX1 M. musculus 99.0 739
NP_001091352.1 ATP-dependent RNA helicase DDX1 X. laevis 94.2 739
NP_001184253.1 ATP-dependent RNA helicase DDX1 D. rerio 89.9 739
NP_524212.2 Dead-box-1 D. melanogaster 68.0 722
NP_500004.2 Protein Y55F3BR.1 C. elegans 56.1 726
XP_001691858.1 hypothetical protein CHLREDRAFT_136100 C. reinhardtii 53.1 767
Other hits (2 of 38) [Show all]SpeciesId(%)Len(aa)
XP_004005743.1 PREDICTED: ATP-dependent RNA helicase DDX1 isoform 1 O. aries 99.3 739
XP_002710081.1 PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 O. cuniculus 99.3 739

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: infant [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; eye; testis; uncharacterized tissue; embryonic tissue; skin; uterus; kidney; placenta; liver; lung; thyroid; ear; mammary gland; mixed; intestine; vascular; mouth; connective tissue; pharynx; prostate; heart; ovary; esophagus; trachea; thymus; spleen; ascites; nerve; bone; bone marrow; muscle; stomach; pancreas; blood; cervix; lymph node; larynx; adrenal gland; bladder; pituitary gland; tonsil; lymph; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 2
Map position: 2p24
UniSTS entry: Chr 2 A006F40 [Map Viewer]
UniSTS entry: Chr 2 G20773
UniSTS entry: Chr 2 WI-7414
UniSTS entry: Chr 2 DDX1_8292
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

BC053673.1 Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 1, mRNA (cDNA clone MGC:61477 IMAGE:6174205), complete cds PA
NM_004939.2 Homo sapiens DEAD (Asp-Glu-Ala-Asp) box helicase 1 (DDX1), mRNA PA
AB073360.1 Homo sapiens primary neuroblastoma cDNA, clone:Nbla10590, full insert sequence
EF418571.1 Homo sapiens clone DDX1-H1 DEAD box polypeptide 1 (DDX1) mRNA, complete cds P
EF418570.1 Homo sapiens clone DDX1-A1 DEAD box polypeptide 1 (DDX1) mRNA, complete cds P
BC012132.1 Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 1, mRNA (cDNA clone MGC:20222 IMAGE:4549185), complete cds PA
AK313933.1 Homo sapiens cDNA, FLJ94573, Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 (DDX1), mRNA P
X70649.1 Homo sapiens DDX1 gene, complete CDS P
AK298426.1 Homo sapiens cDNA FLJ51031 complete cds, highly similar to ATP-dependent RNA helicase DDX1 (EC 3.6.1.-) P
AK298212.1 Homo sapiens cDNA FLJ51017 partial cds, highly similar to ATP-dependent RNA helicase DDX1 (EC 3.6.1.-) P
AK297432.1 Homo sapiens cDNA FLJ57326 complete cds, highly similar to ATP-dependent RNA helicase DDX1 (EC 3.6.1.-) PA
BC012739.2 Homo sapiens cDNA clone IMAGE:3835131, containing frame-shift errors PA
AB593034.1 Homo sapiens DDX1 mRNA for ATP-dependent RNA helicase DDX1, complete cds, clone: HP05190-RBb21D07 PA
AB593033.1 Homo sapiens DDX1 mRNA for ATP-dependent RNA helicase DDX1, complete cds, clone: HP05190-RBb12D06 PA
AB593032.1 Homo sapiens DDX1 mRNA for ATP-dependent RNA helicase DDX1, complete cds, clone: HP05190-RBb11B02 PA
AB593031.1 Homo sapiens DDX1 mRNA for ATP-dependent RNA helicase DDX1, complete cds, clone: HP05190-RBb02F01 PA

EST sequences (10 of 1323) [Show all sequences]

AA991576.1 Clone IMAGE:1609742 mammary gland 3' read PA
AI001170.1 Clone IMAGE:1637742 mammary gland 3' read A
AI066745.1 Clone IMAGE:1638367 testis 3' read PA
AI091268.1 Clone IMAGE:1651384 mixed 3' read PA
CA971134.1 Clone IMAGE:6557085 mixed 5' read
AI124713.1 Clone IMAGE:1540011 brain 3' read P
AI139804.1 Clone IMAGE:1737408 testis 3' read PA
AI167436.1 Clone IMAGE:1661715 mixed 3' read A
R25062.1 Clone IMAGE:35307 brain 5' read P
AI221899.1 Clone IMAGE:1843345 mixed 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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