> Chloride intracellular channel 4 (CLIC4)
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UGID:235581     UniGene Hs.440544     Homo sapiens (human)   CLIC4 Order cDNA clone, Links
Chloride intracellular channel 4 (CLIC4)

Human protein-coding gene CLIC4. Represented by 1501 ESTs from 340 cDNA libraries. Corresponds to reference sequence NM_013943.2. [UniGene 235581 - Hs.440544]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_001106485.1 PREDICTED: chloride intracellular channel protein 4 isoform 3 M. mulatta 100.0 252
XP_003891390.1 PREDICTED: chloride intracellular channel protein 4 P. anubis 100.0 252
XP_001168510.2 PREDICTED: chloride intracellular channel protein 4 isoform 1 P. troglodytes 100.0 252
NP_039234.1 CLIC4 gene product H. sapiens 100.0 252
NP_038913.1 Clic4 gene product M. musculus 99.6 252
NP_001089196.1 chloride intracellular channel 5 X. laevis 92.1 251
NP_958894.1 clic4 gene product D. rerio 90.1 251
Other hits (2 of 22) [Show all]SpeciesId(%)Len(aa)
XP_544493.2 PREDICTED: chloride intracellular channel protein 4 C. lupus familiaris 99.2 252
NP_001073687.1 CLIC4 gene product B. taurus 99.2 252

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; uterus; testis; placenta; embryonic tissue; vascular; uncharacterized tissue; trachea; kidney; connective tissue; skin; lung; lymph node; muscle; liver; heart; mixed; mammary gland; blood; bone; intestine; spleen; eye; thymus; bone marrow; stomach; prostate; parathyroid; adrenal gland; cervix; pancreas; ascites; adipose tissue; nerve; ovary; salivary gland; mouth; ear; thyroid; ganglia; umbilical cord; bladder; tonsil; lymph; pineal gland
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p36.11
UniSTS entry: Chr 1 RH12109
UniSTS entry: Chr 1 SHGC-74412 [Map Viewer]
UniSTS entry: Chr X SHGC-74379 [Map Viewer]
UniSTS entry: G64279
UniSTS entry: Chr 9 GDB:451688
UniSTS entry: Chr X PMC133822P1
UniSTS entry: Chr 10 STS-N20509
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (16)

AL080061.1 Homo sapiens mRNA; cDNA DKFZp564H182 (from clone DKFZp564H182) A
AL117424.1 Homo sapiens mRNA; cDNA DKFZp566G223 (from clone DKFZp566G223) PA
AK001624.1 Homo sapiens cDNA FLJ10762 fis, clone NT2RP4000008, moderately similar to CHLORINE CHANNEL PROTEIN P64 P
AL162008.1 Homo sapiens mRNA; cDNA DKFZp586C2017 (from clone DKFZp586C2017) A
CR533501.1 Homo sapiens full open reading frame cDNA clone RZPDo834E0417D for gene CLIC4, chloride intracellular channel 4; complete cds, incl. stopcodon P
NM_013943.2 Homo sapiens chloride intracellular channel 4 (CLIC4), nuclear gene encoding mitochondrial protein, mRNA PA
AF109196.1 Homo sapiens intracellular chloride channel p64H1 mRNA, complete cds P
AF097330.1 Homo sapiens H1 chloride channel mRNA, complete cds P
BC012444.1 Homo sapiens chloride intracellular channel 4, mRNA (cDNA clone MGC:8812 IMAGE:3861372), complete cds PA
AK308909.1 Homo sapiens cDNA, FLJ98950
AK315051.1 Homo sapiens cDNA, FLJ96000, Homo sapiens chloride intracellular channel 4 (CLIC4), mRNA P
AK307142.1 Homo sapiens cDNA, FLJ97090 P
AK095959.1 Homo sapiens cDNA FLJ38640 fis, clone HHDPC2003472, highly similar to CHLORIDE INTRACELLULAR CHANNEL PROTEIN 4 P
AK301466.1 Homo sapiens cDNA FLJ61180 complete cds, highly similar to Chloride intracellular channel protein 4 P
Z24749.1 H.sapiens polyA site DNA sequence
Z24740.1 H.sapiens DNA sequence

EST sequences (10 of 1501) [Show all sequences]

AA969115.1 Clone IMAGE:1580781 mixed 3' read
AA974951.1 Clone IMAGE:1555477 kidney 3' read A
AA977214.1 Clone IMAGE:1587409 uncharacterized tissue 3' read P
AI016055.1 Clone IMAGE:1636191 kidney 3' read
AI023380.1 Clone IMAGE:1651548 skin 3' read
AI027895.1 Clone IMAGE:1650467 parathyroid 3' read
AA928741.1 Clone IMAGE:1560167 intestine 3' read A
AI033650.1 Clone IMAGE:1647598 parathyroid 3' read
R21143.1 Clone IMAGE:36421 brain 5' read P
AI095729.1 Clone IMAGE:1697240 uterus 3' read A


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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