> Sterile alpha motif domain containing 3 (SAMD3)
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UGID:235545     UniGene Hs.440508     Homo sapiens (human)   SAMD3 Links
Sterile alpha motif domain containing 3 (SAMD3)

Human protein-coding gene SAMD3. Represented by 36 ESTs from 21 cDNA libraries. EST representation biased toward fetus. Corresponds to 2 reference sequences (different isoforms). [UniGene 235545 - Hs.440508]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001017373.2 SAMD3 gene product H. sapiens 100.0 519
NP_001108626.1 Samd3 gene product M. musculus 84.0 513
Other hits (2 of 14) [Show all]SpeciesId(%)Len(aa)
XP_001168456.1 PREDICTED: sterile alpha motif domain-containing protein 3 isoform 3 P. troglodytes 99.2 519
XP_001104456.1 PREDICTED: sterile alpha motif domain-containing protein 3-like isoform 1 M. mulatta 97.7 519

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
Restricted Expression: fetus [show more like this]
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; testis; mixed; uterus; kidney; spleen; thymus; connective tissue; lung; eye; prostate
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 6
Map position: 6q23.1
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (11)

NM_001017373.3 Homo sapiens sterile alpha motif domain containing 3 (SAMD3), transcript variant 1, mRNA PA
BC119757.1 Homo sapiens sterile alpha motif domain containing 3, mRNA (cDNA clone IMAGE:40119307), complete cds P
BC119758.1 Homo sapiens sterile alpha motif domain containing 3, mRNA (cDNA clone IMAGE:40119308), complete cds P
BC127654.1 Homo sapiens cDNA clone IMAGE:40119312 P
BC127653.1 Homo sapiens cDNA clone IMAGE:40119310 P
AK310075.1 Homo sapiens cDNA, FLJ17117 P
BC029851.1 Homo sapiens sterile alpha motif domain containing 3, mRNA (cDNA clone IMAGE:5169922), complete cds PA
AK091882.1 Homo sapiens cDNA FLJ34563 fis, clone KIDNE2002798 P
AK091351.1 Homo sapiens cDNA FLJ34032 fis, clone FCBBF2004138 P
AK302228.1 Homo sapiens cDNA FLJ59783 complete cds, highly similar to Homo sapiens sterile alpha motif domain containing 3 (SAMD3), transcript variant 1, mRNA PA
NM_001258275.1 Homo sapiens sterile alpha motif domain containing 3 (SAMD3), transcript variant 3, mRNA PA

EST sequences (10 of 36) [Show all sequences]

AI002630.1 Clone IMAGE:1629111 mixed 3' read A
AI129628.1 Clone IMAGE:1712916 uterus 3' read A
BX091365.1 Clone IMAGp998M215379_;_IMAGE:2177468 uterus PA
AI220609.1 Clone IMAGE:1840703 mixed 3' read
AI269610.1 Clone IMAGE:1847914 mixed 3' read A
AI499872.1 Clone IMAGE:2177468 uterus 3' read
BX433193.2 Clone CS0DF034YK19 brain 3' read PA
BX431665.2 Clone CS0DF034YK19 brain 5' read P
CV030204.1 mixed 5' read P
DA324146.1 Clone BRHIP3018534 brain 5' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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