> Castor zinc finger 1 (CASZ1)
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UGID:234931     UniGene Hs.439894     Homo sapiens (human)   CASZ1 Order cDNA clone, Links
Castor zinc finger 1 (CASZ1)

Human protein-coding gene CASZ1. Represented by 124 ESTs from 66 cDNA libraries. Corresponds to 2 reference sequences (different isoforms). [UniGene 234931 - Hs.439894]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
NP_001073312.1 CASZ1 gene product H. sapiens 100.0 1758
NP_001152816.1 Casz1 gene product M. musculus 93.4 1761
NP_001104226.1 castor zinc finger 1 X. laevis 74.2 1095
XP_001923862.2 PREDICTED: zinc finger protein castor homolog 1 D. rerio 74.1 1810
NP_524677.1 castor, isoform A D. melanogaster 56.2 144
Other hits (2 of 32) [Show all]SpeciesId(%)Len(aa)
XP_003891146.1 PREDICTED: zinc finger protein castor homolog 1-like, partial P. anubis 98.6 1292
XP_001118792.2 PREDICTED: zinc finger protein castor homolog 1 M. mulatta 98.4 1762

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: skin; eye; lung; mouth; liver; trachea; adipose tissue; kidney; pancreas; uterus; mixed; intestine; uncharacterized tissue; ovary; mammary gland; stomach; prostate; placenta; cervix; thymus; brain; embryonic tissue; ascites; pineal gland; connective tissue; lymph node
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p36.22
UniSTS entry: Chr 1 D4Ertd432e
UniSTS entry: Chr 1 SHGC-58917
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (12)

BC051883.2 Homo sapiens castor zinc finger 1, mRNA (cDNA clone MGC:60281 IMAGE:5534858), complete cds PA
AK130996.1 Homo sapiens cDNA FLJ27486 fis, clone RCT02754
AK000328.1 Homo sapiens cDNA FLJ20321 fis, clone HEP09380 PA
NM_017766.4 Homo sapiens castor zinc finger 1 (CASZ1), transcript variant 2, mRNA PA
DQ372703.1 Homo sapiens survival-related (SRG) mRNA, complete cds A
AK225324.1 Homo sapiens mRNA for Probable transcription factor CST variant, clone: HEP09380 PA
BC004410.1 Homo sapiens castor zinc finger 1, mRNA (cDNA clone IMAGE:3639341), partial cds PA
DQ217660.1 Homo sapiens castor long variant (CAS11) mRNA, complete cds PA
NM_001079843.2 Homo sapiens castor zinc finger 1 (CASZ1), transcript variant 1, mRNA PA
AK311700.1 Homo sapiens cDNA, FLJ18742 P
AK092289.1 Homo sapiens cDNA FLJ34970 fis, clone NTONG2005363, highly similar to Castor homolog 1 zinc finger protein P
AK293839.1 Homo sapiens cDNA FLJ56058 complete cds, highly similar to Castor homolog 1 zinc finger protein P

EST sequences (10 of 124) [Show all sequences]

CB049721.1 Clone IMAGE:3271463 prostate 3' read A
CB049722.1 Clone IMAGE:3271463 prostate 5' read A
BX098538.1 Clone IMAGp998H23922_;_IMAGE:396358 pineal gland A
BX098222.1 Clone IMAGp998I115281_;_IMAGE:2139730 stomach A
R32738.1 Clone IMAGE:135238 placenta 5' read
R32739.1 Clone IMAGE:135238 placenta 3' read
AI283046.1 Clone IMAGE:1893304 placenta 3' read
AI287551.1 Clone IMAGE:1891588 placenta 3' read
R50443.1 Clone IMAGE:152735 mammary gland 5' read
R50444.1 Clone IMAGE:152735 mammary gland 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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