> Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 (LAMTOR5)
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UGID:234852     UniGene Hs.439815     Homo sapiens (human)   LAMTOR5 Order cDNA clone, Links
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 (LAMTOR5)

Human protein-coding gene LAMTOR5. Represented by 501 ESTs from 191 cDNA libraries. Corresponds to reference sequence NM_006402.2. [UniGene 234852 - Hs.439815]

SELECTED PROTEIN SIMILARITIES
Comparison of cluster transcripts with RefSeq proteins. The alignments can suggest function of the cluster.
Best Hits and Hits from model organismsSpeciesId(%)Len(aa)
XP_003949573.1 PREDICTED: uncharacterized protein LOC457120 P. troglodytes 100.0 172
NP_006393.2 LAMTOR5 gene product H. sapiens 100.0 172
XP_003365112.1 PREDICTED: hepatitis B virus X-interacting protein homolog E. caballus 100.0 90
NP_001029689.1 LAMTOR5 gene product B. taurus 100.0 90
XP_004002355.1 PREDICTED: hepatitis B virus X-interacting protein homolog O. aries 100.0 90
XP_002715477.1 PREDICTED: hepatitis B virus x interacting protein-like O. cuniculus 100.0 90
XP_003360968.1 PREDICTED: hepatitis B virus X-interacting protein homolog, partial S. scrofa 100.0 86
XP_537033.2 PREDICTED: hepatitis B virus X-interacting protein homolog C. lupus familiaris 100.0 78
NP_081050.2 Lamtor5 gene product M. musculus 95.7 140
NP_001084999.1 hepatitis B virus X-interacting protein homolog X. laevis 84.6 90
Other hits (2 of 8) [Show all]SpeciesId(%)Len(aa)
XP_001381974.1 PREDICTED: hepatitis B virus X-interacting protein homolog M. domestica 98.9 90
XP_001508400.1 PREDICTED: hepatitis B virus X-interacting protein homolog O. anatinus 97.5 78

GENE EXPRESSION
Tissues and development stages from this gene's sequences survey gene expression. Links to other NCBI expression resources.
EST Profile: Approximate expression patterns inferred from EST sources.
[Show more entries with profiles like this]
GEO Profiles: Experimental gene expression data (Gene Expression Omnibus).
cDNA Sources: brain; lung; testis; ascites; mixed; parathyroid; prostate; pancreas; uterus; bladder; eye; mammary gland; skin; kidney; bone marrow; intestine; liver; placenta; adrenal gland; pharynx; ovary; heart; uncharacterized tissue; larynx; embryonic tissue; blood; stomach; muscle; lymph node; connective tissue; cervix; vascular; lymph; bone; pituitary gland; salivary gland; pineal gland; umbilical cord; thymus
MAPPING POSITION
Genomic location specified by transcript mapping, radiation hybrid mapping, genetic mapping or cytogenetic mapping.
Chromosome: 1
Map position: 1p13.3
UniSTS entry: Chr 1 WIAF-2073
UniSTS entry: Chr 1 G20883
UniSTS entry: Chr 1 A006J43
SEQUENCES
Sequences representing this gene; mRNAs, ESTs, and gene predictions supported by transcribed sequences.

mRNA sequences (6)

NM_006402.2 Homo sapiens late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 (LAMTOR5), mRNA PA
BC062619.1 Homo sapiens hepatitis B virus x interacting protein, mRNA (cDNA clone MGC:71071 IMAGE:5190406), complete cds PA
CR456866.1 Homo sapiens full open reading frame cDNA clone RZPDo834H0615D for gene HBXIP, hepatitis B virus x interacting protein; complete cds, incl. stopcodon P
CR542130.1 Homo sapiens full open reading frame cDNA clone RZPDo834D1123D for gene HBXIP, hepatitis B virus x interacting protein; complete cds, without stopcodon P
AY623819.1 Homo sapiens hepatitis B virus x interacting protein (HBXIP) mRNA, complete cds P
AF029890.1 Homo sapiens hepatitis B virus X interacting protein (XIP) mRNA, complete cds PA

EST sequences (10 of 501) [Show all sequences]

AA903215.1 Clone IMAGE:1517741 uncharacterized tissue 3' read
AA969528.1 Clone IMAGE:1572972 kidney 3' read A
AA972750.1 Clone IMAGE:1585088 lung 3' read A
AA973207.1 Clone IMAGE:1564290 mixed 3' read A
AA973237.1 Clone IMAGE:1597412 uncharacterized tissue 3' read A
AA995522.1 Clone IMAGE:1606636 kidney 3' read A
R17197.1 Clone IMAGE:31722 brain 5' read
AI026162.1 Clone IMAGE:1647403 parathyroid 3' read A
AA928935.1 Clone IMAGE:1567773 lung 3' read A
AI038801.1 Clone IMAGE:1664143 skin 3' read


Key to Symbols

P Has similarity to known Proteins (after translation)
A Contains a poly-Adenylation signal
S Sequence is a Suboptimal member of this cluster
M Clone is putatively CDS-complete by MGC criteria

 
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